[Debian-med-packaging] Bug#894213: foo FTBFS with dh-python >= 3.20180313

Andreas Tille andreas at an3as.eu
Mon Apr 30 13:28:23 BST 2018


Hi Piotr,

On Thu, Apr 26, 2018 at 12:01:17PM +0200, Piotr Ożarowski wrote:
> [Andreas Tille, 2018-04-26]
> >    ModuleNotFoundError: No module named 'skbio'
> 
> that's because I had to change pybuild's internal paths (to make it work
> with multiple modules/packages at the same time).
> 
> I added --print option for those who really need it (f.e. while
> building sphinx docs) - please use it instead of hardcoding pybuild's
> internal paths.
> 
> You can use it like this:
> 
>  PYTHONPATH=$(shell pybuild --print build_dir --interpreter python3) ...

This worked nicely for python-skbio.
 
> I fixed few packages already, here's a list of other affected ones:
> ...
> snakemake       Debian Med Packaging Team

I tried the same trick for snakemake in Git[1] but failed.

Am I missing something?

Kind regards

       Andreas.


[1] https://salsa.debian.org/med-team/snakemake 

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