[Debian-med-packaging] Bug#905438: htslib: FTBFS on i386: 2 tests fail

Andreas Beckmann anbe at debian.org
Sat Aug 4 15:45:42 BST 2018


Source: htslib
Version: 1.9-1
Severity: serious
Tags: ftbfs
Justification: fails to build from source (but built successfully in the past)

Hi,

htslib/experimental FTBFS on i386:
https://buildd.debian.org/status/fetch.php?pkg=htslib&arch=i386&ver=1.9-1&stamp=1532825380&raw=0


  ./test_view - at 4 -i reference=ce.fa range.cram CHROMOSOME_II:2980-2980 CHROMOSOME_IV:1500-1500 CHROMOSOME_II:2980-2980 CHROMOSOME_I:1000-1100 > range.tmp
  ./compare_sam.pl range.tmp range.out
  ./test_view - at 4 range.bam CHROMOSOME_II:2980-2980 CHROMOSOME_IV:1500-1500 CHROMOSOME_II:2980-2980 CHROMOSOME_I:1000-1100 > range.tmp
  ./compare_sam.pl range.tmp range.out
test_vcf_api:
	/<<PKGBUILDDIR>>/test/test-vcf-api /tmp/JMIB5wVvT_/test-vcf-api.bcf
bcf_get_format_float didn't produce the expected output.

.. failed ...

test_vcf_sweep:
	/<<PKGBUILDDIR>>/test/test-vcf-sweep /tmp/JMIB5wVvT_/test-vcf-api.bcf

	The outputs differ:
		/<<PKGBUILDDIR>>/test/test-vcf-sweep.out
		/<<PKGBUILDDIR>>/test/test-vcf-sweep.out.new
.. failed ...


Andreas



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