[Debian-med-packaging] Bug#906371: jmodeltest: FTBFS in buster/sid

Santiago Vila sanvila at debian.org
Fri Aug 17 12:20:11 BST 2018


Package: src:jmodeltest
Version: 2.1.10+dfsg-6
Severity: serious
Tags: ftbfs

Dear maintainer:

I tried to build this package in buster but it failed:

--------------------------------------------------------------------------------
[...]
 debian/rules build-indep
dh build-indep --with javahelper
   dh_update_autotools_config -i
   dh_autoreconf -i
   dh_auto_configure -i
   jh_linkjars -i
   debian/rules override_dh_auto_build
make[1]: Entering directory '/<<BUILDDIR>>/jmodeltest-2.1.10+dfsg'
dh_auto_build
	ant -Duser.name debian
Buildfile: /<<BUILDDIR>>/jmodeltest-2.1.10+dfsg/build.xml

compile:
    [mkdir] Created dir: /<<BUILDDIR>>/jmodeltest-2.1.10+dfsg/build/classes

[... snipped ...]

    [javac] 				             ^
    [javac] /<<BUILDDIR>>/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/utilities/MyTableModel.java:284: warning: [deprecation] Double(double) in Double has been deprecated
    [javac] 				data[i][8] = new Double(Round(
    [javac] 				             ^
    [javac] /<<BUILDDIR>>/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/utilities/TableSorter.java:317: warning: [deprecation] getModifiers() in InputEvent has been deprecated
    [javac]                     int shiftPressed = e.getModifiers()&InputEvent.SHIFT_MASK; 
    [javac]                                         ^
    [javac] /<<BUILDDIR>>/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/utilities/TableSorter.java:317: warning: [deprecation] SHIFT_MASK in InputEvent has been deprecated
    [javac]                     int shiftPressed = e.getModifiers()&InputEvent.SHIFT_MASK; 
    [javac]                                                                   ^
    [javac] /<<BUILDDIR>>/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/utilities/MyTableCellRenderer.java:55: warning: [deprecation] Integer(int) in Integer has been deprecated
    [javac] 			whichValue = new Integer(ModelTest.getMinAIC().getId());
    [javac] 			             ^
    [javac] /<<BUILDDIR>>/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/utilities/MyTableCellRenderer.java:57: warning: [deprecation] Integer(int) in Integer has been deprecated
    [javac] 			whichValue = new Integer(ModelTest.getMinAICc().getId());
    [javac] 			             ^
    [javac] /<<BUILDDIR>>/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/utilities/MyTableCellRenderer.java:59: warning: [deprecation] Integer(int) in Integer has been deprecated
    [javac] 			whichValue = new Integer(ModelTest.getMinBIC().getId());
    [javac] 			             ^
    [javac] /<<BUILDDIR>>/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/utilities/MyTableCellRenderer.java:61: warning: [deprecation] Integer(int) in Integer has been deprecated
    [javac] 			whichValue = new Integer(ModelTest.getMinDT().getId());
    [javac] 			             ^
    [javac] /<<BUILDDIR>>/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/utilities/MyTableCellRenderer.java:63: warning: [deprecation] Integer(int) in Integer has been deprecated
    [javac] 			whichValue = new Integer(0);	
    [javac] 			             ^
    [javac] /<<BUILDDIR>>/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/gui/Frame_Progress.java:60: warning: [deprecation] Observer in java.util has been deprecated
    [javac] public class Frame_Progress extends JModelTestFrame implements Observer,
    [javac]                                                                ^
    [javac] /<<BUILDDIR>>/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/gui/Frame_Progress.java:368: warning: [deprecation] Observable in java.util has been deprecated
    [javac] 	public synchronized void update(Observable o, Object arg) {
    [javac] 	                                ^
    [javac] /<<BUILDDIR>>/jmodeltest-2.1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/io/HtmlReporter.java:111: warning: [deprecation] Integer(int) in Integer has been deprecated
    [javac] 		datamodel.put("isTopologiesSummary", summary!=null ? new Integer(1) : new Integer(0));
    [javac] 		                                                     ^
    [javac] Note: Some input files additionally use or override a deprecated API.
    [javac] 8 errors
    [javac] 100 warnings

BUILD FAILED
/<<BUILDDIR>>/jmodeltest-2.1.10+dfsg/build.xml:37: Compile failed; see the compiler error output for details.

Total time: 3 seconds
dh_auto_build: ant -Duser.name debian returned exit code 1
make[1]: *** [debian/rules:14: override_dh_auto_build] Error 2
make[1]: Leaving directory '/<<BUILDDIR>>/jmodeltest-2.1.10+dfsg'
make: *** [debian/rules:11: build-indep] Error 2
dpkg-buildpackage: error: debian/rules build-indep subprocess returned exit status 2
--------------------------------------------------------------------------------

The build was made with "dpkg-buildpackage -A" in my autobuilder.
Most probably, it also fails here in reproducible builds:

https://tests.reproducible-builds.org/debian/rb-pkg/unstable/amd64/jmodeltest.html

where you can get a full build log if you need it.

If this is really a bug in one of the build-depends, please use reassign and affects,
so that this is still visible in the BTS web page for this package.

Thanks.



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