[Debian-med-packaging] Bug#906156: Python-skbio not compatible with latest pandas

Andreas Tille andreas at an3as.eu
Tue Aug 21 17:32:26 BST 2018


Control: forwarded -1 https://github.com/biocore/scikit-bio/issues/1585

----- Forwarded message from Yoshiki Vázquez Baeza <notifications at github.com> -----

Date: Tue, 21 Aug 2018 09:25:21 -0700
From: Yoshiki Vázquez Baeza <notifications at github.com>
To: biocore/scikit-bio <scikit-bio at noreply.github.com>
Cc: Andreas Tille <tille at debian.org>, Mention <mention at noreply.github.com>
Subject: Re: [biocore/scikit-bio] Test suite fails with Python 3.7 (#1595)

You are correct, skbio currently does not work with the latest version 
of Pandas. That being said, we do plan to support the newest version of 
Pandas. We have an issue for that here: 
https://github.com/biocore/scikit-bio/issues/1585

On (Aug-21-18| 1:44), Andreas Tille wrote:
>Hi,
>On Mon, Aug 20, 2018 at 02:15:06PM -0700, Yoshiki Vázquez Baeza wrote:
>> If you check with `pandas >= 0.19.2, < 0.23.0`, tests should pass.
>Ahh, this means skbio is not yet adapted to latest pandas version?  For the Debian package I do not have an option to pick some specific pandas version since only one version is supported as Debian package and I need to build against a packaged version.  Do you intend to support latest pandas in the near future?
>Kind regards, Andreas.
>
>
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>You are receiving this because you commented.
>Reply to this email directly or view it on GitHub:
>https://github.com/biocore/scikit-bio/issues/1595#issuecomment-414598824


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