[Debian-med-packaging] Bug#890137: jellyfish FTBFS on arm64/ppc64el: FAIL: tests/generate_sequence

Adrian Bunk bunk at debian.org
Sun Feb 11 13:44:09 UTC 2018


Source: jellyfish
Version: 2.2.7-1
Severity: serious

https://buildd.debian.org/status/package.php?p=jellyfish

...
FAIL: tests/generate_sequence
=============================

Seed: 3141592653
Creating fasta file 'seq10m.fa'
Seed: 1040104553
Creating fasta file 'seq1m_0.fa'
Creating fasta file 'seq1m_1.fa'
Creating fasta file 'seq1m_2.fa'
Creating fasta file 'seq1m_3.fa'
Creating fasta file 'seq1m_4.fa'
Seed: 1473540700
Creating fastq file 'seq10m.fq'
Usage: fastq2sam [options] fastq:string+
Use --help for more information
FAIL tests/generate_sequence.sh (exit status: 1)

SKIP: tests/big
===============

Skip big test
SKIP tests/big.sh (exit status: 77)

SKIP: tests/sam
===============

Skip SAM/BAM/CRAM file format test
SKIP tests/sam.sh (exit status: 77)

SKIP: tests/swig_python
=======================

SKIP tests/swig_python.sh (exit status: 77)

SKIP: tests/swig_ruby
=====================

SKIP tests/swig_ruby.sh (exit status: 77)

============================================================================
Testsuite summary for jellyfish 2.2.7
============================================================================
# TOTAL: 14
# PASS:  9
# SKIP:  4
# XFAIL: 0
# FAIL:  1
# XPASS: 0
# ERROR: 0
============================================================================
See ./test-suite.log
Please report to gmarcais at umd.edu
============================================================================
Makefile:2280: recipe for target 'test-suite.log' failed
make[4]: *** [test-suite.log] Error 1


There are also FTBFS on other architectures, but the arm64/ppc64el
ones are RC since 2.2.6-6 built there.



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