[Debian-med-packaging] beast-mcmc2: Cannot find symbol CharStreams.fromString(newick)

[Andreas Tille]

Hi,

I think I came very close with beast-mcmc2 package[1] but there are two
remaining errors:


compile-all:
     [echo] Building BEAST 2
    [mkdir] Created dir: /build/beast2-mcmc-2.5.0+dfsg/build
    [javac] Compiling 470 source files to /build/beast2-mcmc-2.5.0+dfsg/build
    [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
    [javac] /build/beast2-mcmc-2.5.0+dfsg/src/beast/util/TreeParser.java:353: error: cannot find symbol
    [javac]         CharStream charStream = CharStreams.fromString(newick);
    [javac]                                 ^
    [javac]   symbol:   variable CharStreams
    [javac]   location: class TreeParser
    [javac] /build/beast2-mcmc-2.5.0+dfsg/src/beast/util/treeparser/NewickLexer.java:98: error: method does not override or implement a method from a supertype
    [javac]     @Override
    [javac]     ^
    [javac] Note: Some input files use or override a deprecated API.
    [javac] Note: Recompile with -Xlint:deprecation for details.
    [javac] Note: Some input files use unchecked or unsafe operations.
    [javac] Note: Recompile with -Xlint:unchecked for details.
    [javac] 2 errors
    [javac] 1 warning


Any hint how to fix this?

Kind regards

        Andreas.


[1] https://salsa.debian.org/med-team/beast2-mcmc

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