[Debian-med-packaging] Bug#901105: ciftilib: FTBFS when built with dpkg-buildpackage -A

Santiago Vila sanvila at debian.org
Sat Jun 9 00:23:04 BST 2018


Package: src:ciftilib
Version: 1.5.1-1
Severity: serious

Dear maintainer:

I tried to build this package in stretch with "dpkg-buildpackage -A"
but it failed:

--------------------------------------------------------------------------------
[...]
 debian/rules build-indep
dh build-indep
   dh_update_autotools_config -i
   dh_autoreconf -i
   debian/rules override_dh_auto_configure
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_auto_configure -- -DBUILD_SHARED_LIBS=ON -DIGNORE_QT=ON
	cd obj-x86_64-linux-gnu && cmake .. -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON "-GUnix Makefiles" -DBUILD_SHARED_LIBS=ON -DIGNORE_QT=ON
CMake Deprecation Warning at CMakeLists.txt:7 (CMAKE_POLICY):
  The OLD behavior for policy CMP0045 will be removed from a future version
  of CMake.

  The cmake-policies(7) manual explains that the OLD behaviors of all
  policies are deprecated and that a policy should be set to OLD only under

[... snipped ...]

CMake Error at /<<PKGBUILDDIR>>/cmake/scripts/testmd5.cmake:1 (FILE):
  FILE MD5 failed to read file "big-ones.dscalar.nii": No such file or
  directory




0% tests passed, 25 tests failed out of 25

Total Test time (real) =   0.17 sec

The following tests FAILED:
	  1 - info-Conte69.MyelinAndCorrThickness.32k_fs_LR.dscalar.nii (Not Run)
	  2 - rewrite-little-Conte69.MyelinAndCorrThickness.32k_fs_LR.dscalar.nii (Not Run)
	  3 - rewrite-little-md5-Conte69.MyelinAndCorrThickness.32k_fs_LR.dscalar.nii (Failed)
	  4 - rewrite-big-Conte69.MyelinAndCorrThickness.32k_fs_LR.dscalar.nii (Not Run)
	  5 - rewrite-big-md5-Conte69.MyelinAndCorrThickness.32k_fs_LR.dscalar.nii (Failed)
	  6 - info-Conte69.MyelinAndCorrThickness.32k_fs_LR.dtseries.nii (Not Run)
	  7 - rewrite-little-Conte69.MyelinAndCorrThickness.32k_fs_LR.dtseries.nii (Not Run)
	  8 - rewrite-little-md5-Conte69.MyelinAndCorrThickness.32k_fs_LR.dtseries.nii (Failed)
	  9 - rewrite-big-Conte69.MyelinAndCorrThickness.32k_fs_LR.dtseries.nii (Not Run)
	 10 - rewrite-big-md5-Conte69.MyelinAndCorrThickness.32k_fs_LR.dtseries.nii (Failed)
	 11 - info-Conte69.MyelinAndCorrThickness.32k_fs_LR.ptseries.nii (Not Run)
	 12 - rewrite-little-Conte69.MyelinAndCorrThickness.32k_fs_LR.ptseries.nii (Not Run)
	 13 - rewrite-little-md5-Conte69.MyelinAndCorrThickness.32k_fs_LR.ptseries.nii (Failed)
	 14 - rewrite-big-Conte69.MyelinAndCorrThickness.32k_fs_LR.ptseries.nii (Not Run)
	 15 - rewrite-big-md5-Conte69.MyelinAndCorrThickness.32k_fs_LR.ptseries.nii (Failed)
	 16 - info-Conte69.parcellations_VGD11b.32k_fs_LR.dlabel.nii (Not Run)
	 17 - rewrite-little-Conte69.parcellations_VGD11b.32k_fs_LR.dlabel.nii (Not Run)
	 18 - rewrite-little-md5-Conte69.parcellations_VGD11b.32k_fs_LR.dlabel.nii (Failed)
	 19 - rewrite-big-Conte69.parcellations_VGD11b.32k_fs_LR.dlabel.nii (Not Run)
	 20 - rewrite-big-md5-Conte69.parcellations_VGD11b.32k_fs_LR.dlabel.nii (Failed)
	 21 - info-ones.dscalar.nii (Not Run)
	 22 - rewrite-little-ones.dscalar.nii (Not Run)
	 23 - rewrite-little-md5-ones.dscalar.nii (Failed)
	 24 - rewrite-big-ones.dscalar.nii (Not Run)
	 25 - rewrite-big-md5-ones.dscalar.nii (Failed)
Errors while running CTest
Makefile:110: recipe for target 'test' failed
make[1]: *** [test] Error 8
make[1]: Leaving directory '/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu'
dh_auto_test: cd obj-x86_64-linux-gnu && make -j1 test ARGS\+=-j1 returned exit code 2
debian/rules:11: recipe for target 'build-indep' failed
make: *** [build-indep] Error 2
dpkg-buildpackage: error: debian/rules build-indep subprocess returned exit status 2
--------------------------------------------------------------------------------

To reproduce, please try "dpkg-buildpackage -A".
(The error does not happen with "dpkg-buildpackage").

Thanks.



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