[Debian-med-packaging] Bug#901145: ITP: spoa -- SIMD partial order alignment tool
Andreas Tille
tille at debian.org
Sat Jun 9 13:15:33 BST 2018
Package: wnpp
Severity: wishlist
Owner: Andreas Tille <tille at debian.org>
* Package name : spoa
Version : 1.1.3
Upstream Author : Robert Vaser
* URL : https://github.com/rvaser/spoa
* License : MIT
Programming Lang: C++
Description : SIMD partial order alignment tool
Spoa (SIMD POA) is a c++ implementation of the partial order alignment
(POA) algorithm (as described in 10.1093/bioinformatics/18.3.452) which
is used to generate consensus sequences (as described in
10.1093/bioinformatics/btg109). It supports three alignment modes: local
(Smith-Waterman), global (Needleman-Wunsch) and semi-global alignment
(overlap).
Remark: This package is maintained by Debian Med Packaging Team at
https://salsa.debian.org/med-team/spoa
This is a predepends to package racon (see #890187)
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