[Debian-med-packaging] Bug#898207: r-cran-rnexml: autopkgtest regression

Graham Inggs ginggs at debian.org
Sun May 13 15:20:04 BST 2018


Since the upload of r-cran-rnexml 2.1.1-1, the failure is now:

-- 1. Error: we can perform sparql queries with rdf (@test_rdf.R#26)  ----------
xslt package required to convert to rdf
1: get_rdf(system.file("examples/primates.xml", package = "RNeXML"))
at testthat/test_rdf.R:26
2: stop("xslt package required to convert to rdf", call. = FALSE)

-- 2. Error: (unknown) (@test_taxonomy.R#7)  -----------------------------------
taxize package required to convert look up taxonomic ids
1: taxize_nexml(birds, "NCBI") at testthat/test_taxonomy.R:7
2: stop("taxize package required to convert look up taxonomic ids",
call. = FALSE)

== testthat results  ===========================================================
OK: 144 SKIPPED: 5 FAILED: 2
1. Error: we can perform sparql queries with rdf (@test_rdf.R#26)
2. Error: (unknown) (@test_taxonomy.R#7)



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