[Debian-med-packaging] Bug#899205: python-cogent: Test suite fails with latest matplotlib

Andreas Tille tille at debian.org
Sun May 20 20:40:27 BST 2018


Package: python-cogent
Severity: serious
Justification: FTBFS
User: debian-ci at lists.debian.org

The package fails to build with latest matplotlib which became
obvious in the CI report[1].  It fails as well when building the
package.

The issue is reported upstream.[2]

Kind regards,

      Andreas.

[1] https://ci.debian.net/packages/p/python-cogent/testing/amd64/
[2] https://github.com/pycogent/pycogent/issues/112


-- System Information:
Debian Release: 9.0
  APT prefers stable-updates
  APT policy: (500, 'stable-updates'), (500, 'stable')
Architecture: amd64 (x86_64)

Kernel: Linux 4.9.0-5-amd64 (SMP w/1 CPU core)
Locale: LANG=de_DE.UTF-8, LC_CTYPE=de_DE.UTF-8 (charmap=UTF-8), LANGUAGE=de_DE.UTF-8 (charmap=UTF-8)
Shell: /bin/sh linked to /bin/dash
Init: systemd (via /run/systemd/system)

Versions of packages python-cogent depends on:
ii  libc6              2.24-11+deb9u1
ii  python             2.7.13-2
pn  python-matplotlib  <none>
pn  python-numpy       <none>
pn  python-numpy-abi9  <none>

Versions of packages python-cogent recommends:
pn  blast2    <none>
pn  bwa       <none>
pn  cd-hit    <none>
pn  clearcut  <none>
pn  dialign   <none>
pn  muscle    <none>

Versions of packages python-cogent suggests:
pn  cdbfasta           <none>
pn  clustalw           <none>
pn  fasttree           <none>
pn  infernal           <none>
pn  mafft              <none>
pn  mothur             <none>
pn  parsinsert         <none>
pn  python-cogent-doc  <none>
pn  raxml              <none>
pn  rdp-classifier     <none>
pn  rtax               <none>



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