[Debian-med-packaging] Bug#842815: Help needed for HDF5 1.10 transition of libsis-jhdf5-java

Bernd Rinn brinn at ethz.ch
Mon May 28 08:18:28 BST 2018


Hello Andreas,

On 05/27/2018 07:12 AM, Andreas Tille wrote:
> Hello Bernd,
> 
> sorry for nagging again but we now have another Dependency from
> sis-jhdf5 which makes a fix for this issue even more interesting.  As I
> said before I would also try a patch if you might hesitate to issue a
> completely new release.

It is embarrassing to admit that I still haven't found the time to port
JHDF5 to HDF5 1.10.

If you can come up with a patch to bridge to time that would be greatly
appreciated!

Kind regards,
Bernd
     Andreas.
> 
> On Wed, Sep 06, 2017 at 12:50:56PM +0200, Andreas Tille wrote:
>> Hello Bernd,
>>
>> On Wed, 23 Nov 2016 06:54:21 +0100, you wrote
>>> the migration of JHDF5 to HDF5 1.10 is ongoing and mostly depend on me
>>> having a block of time I can spend on it. Your analysis of the work that
>>> needs to be done is right from what I can see. The plan is to switch to
>>> using the JNI library from the HDF group wherever possible (it may still
>>> be necessary to have a small JNI library though as some calls appear to
>>> be missing).
>>>
>>> I will keep you updated.
>>
>> Is there any news, may be only a patch for the existing version we
>> could try to fix the Debian package?
>>
>> Kind regards
>>
>>        Andreas.
>>
>> -- 
>> http://fam-tille.de
>>
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>>
> 

-- 
Dr. Bernd Rinn
Head Scientific IT Services
ETH Zurich IT Services
SIB Swiss Institute of Bioinformatics
Weinbergstr. 11 (WEC D 19), 8092 Zürich, Switzerland, +41 44 632 0608
Mattenstr. 26 (BSB 1.01), 4058 Basel, Switzerland, +41 61 387 3130

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