[Debian-med-packaging] Bug#905438: htslib: FTBFS on i386: 2 tests fail

Michael Crusoe michael.crusoe at gmail.com
Sat Oct 13 14:47:14 BST 2018


Andreas Tille, et al. I propose that we drop *-i386 for htslib, as it is
blocking a lot of packages.

On Sat, 04 Aug 2018 16:45:42 +0200 Andreas Beckmann <anbe at debian.org> wrote:
> Source: htslib
> Version: 1.9-1
> Severity: serious
> Tags: ftbfs
> Justification: fails to build from source (but built successfully in the
past)
>
> Hi,
>
> htslib/experimental FTBFS on i386:
>
https://buildd.debian.org/status/fetch.php?pkg=htslib&arch=i386&ver=1.9-1&stamp=1532825380&raw=0
>
>
>   ./test_view - at 4 -i reference=ce.fa range.cram CHROMOSOME_II:2980-2980
CHROMOSOME_IV:1500-1500 CHROMOSOME_II:2980-2980 CHROMOSOME_I:1000-1100 >
range.tmp
>   ./compare_sam.pl range.tmp range.out
>   ./test_view - at 4 range.bam CHROMOSOME_II:2980-2980
CHROMOSOME_IV:1500-1500 CHROMOSOME_II:2980-2980 CHROMOSOME_I:1000-1100 >
range.tmp
>   ./compare_sam.pl range.tmp range.out
> test_vcf_api:
> /<<PKGBUILDDIR>>/test/test-vcf-api /tmp/JMIB5wVvT_/test-vcf-api.bcf
> bcf_get_format_float didn't produce the expected output.
>
> .. failed ...
>
> test_vcf_sweep:
> /<<PKGBUILDDIR>>/test/test-vcf-sweep /tmp/JMIB5wVvT_/test-vcf-api.bcf
>
> The outputs differ:
> /<<PKGBUILDDIR>>/test/test-vcf-sweep.out
> /<<PKGBUILDDIR>>/test/test-vcf-sweep.out.new
> .. failed ...
>
>
> Andreas
>
>
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