[Debian-med-packaging] Bug#907819: jellyfish: Does not build on paths containing "-L"

[Santiago Vila]

On Mon, Sep 03, 2018 at 01:00:15AM +0300, Adrian Bunk wrote:

> jellyfish doesn't do anything here that strikes me as wrong,
> my first suspects for the root cause would be libtool or automake.

Well, I see this kind of thing in examples/jf_count_dump/Makefile

LDFLAGS = -Wl,--rpath=$(shell pkg-config --libs-only-L jellyfish-2.0 | sed -e 's/-L//g')

That might work if the output of pkg-config is somewhere in /usr/[...]
but I guess this is being used with the installed version at
WHATEVER/debian/tmp/[...].

Then there is the python script

swig/python/setup.py

which does stuff regarding libraries and paths, this is partially
patched by debian/patches/drop-rpath.

Thanks.