[Debian-med-packaging] Bug#906337: Any clue how to circumvent issues with MPI on autobuilders
Andreas Tille
tille at debian.org
Fri Sep 14 13:48:57 BST 2018
Control: tags -1 pending
On Fri, Sep 14, 2018 at 10:33:28AM +0200, Johannes Ring wrote:
>
> In debian/rules in dolfin, we use the following to allow test programs to
> run with OpenMPI:
>
> export OMPI_MCA_plm_rsh_agent=/bin/false
>
> Maybe that will fix your problem.
This is set in bioperl-run. Meanwhile I've found out that the issue is
caused by the phyml test and recently Graham added
export OMPI_MCA_rmaps_base_oversubscribe=1
which here solved the problem as well.
Thanks for the hint anyway
Andreas.
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