[Debian-med-packaging] Bug#925909: [Help] Re: pbgenomicconsensus: autopkgtest regression

[Liubov Chuprikova]

Hi,

On Sun, 7 Apr 2019 at 11:30, Graham Inggs <ginggs at debian.org> wrote:

> Hi Andeas
>
> On Sun, 7 Apr 2019 at 07:50, Andreas Tille <andreas at an3as.eu> wrote:
> > I have no idea why command1 is failing.  Anybody who can reproduce
> > this test result and can fix this test?
>
> The output of command1 is the following:
>
> autopkgtest [15:39:43]: test command1: unset GZIP && cp -r Makefile
> tests $AUTOPKGTEST_TMP && cd $AUTOPKGTEST_TMP && make tests
> autopkgtest [15:39:43]: test command1: [-----------------------
> # Unit tests
> # ignore tests requiring
> https://github.com/PacificBiosciences/PacBioTestData which is not
> packaged
> set -e ; \
> TMPDIR=$(mktemp -d /tmp/test_ignore_XXXXXX) ; \
> mv tests/unit/test_tool_contract.py ${TMPDIR} ; \
> py.test --junit-xml=nosetests.xml tests/unit ; \
> rm -rf tests/unit/__pycache__ ; \
> mv ${TMPDIR}/* tests/unit ; \
> rmdir ${TMPDIR}
> /bin/bash: line 3: py.test: command not found
> make: *** [Makefile:12: unit-tests] Error 127
> autopkgtest [15:39:44]: test command1: -----------------------]
> autopkgtest [15:39:44]: test command1:  - - - - - - - - - - results -
> - - - - - - - - -
> command1             FAIL non-zero exit status 2
>
> I think all that is needed here is adding a test dependency on
> python-pytest.  See the 'available diffs' section on Steve Langasek's
> upload [1].
>

I have just added python-pytest and one more missing library. Now the tests
should pass.

With regards,
Liubov
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://alioth-lists.debian.net/pipermail/debian-med-packaging/attachments/20190407/1ab32201/attachment.html>