[Debian-med-packaging] Bug#926995: ITP: umis -- tools for processing UMI RNA-tag data
Andreas Tille
tille at debian.org
Sat Apr 13 09:28:43 BST 2019
Package: wnpp
Severity: wishlist
Subject: ITP: umis -- tools for processing UMI RNA-tag data
Package: wnpp
Owner: Andreas Tille <tille at debian.org>
Severity: wishlist
* Package name : umis
Version : 1.0.3
Upstream Author : Valentine Svensson
* URL : https://github.com/vals/umis
* License : MIT
Programming Lang: Python
Description : tools for processing UMI RNA-tag data
Umis provides tools for estimating expression in RNA-Seq data which
performs sequencing of end tags of transcript, and incorporate molecular
tags to correct for amplification bias.
.
There are four steps in this process.
.
1. Formatting reads
2. Filtering noisy cellular barcodes
3. Pseudo-mapping to cDNAs
4. Counting molecular identifiers
Remark: This package is maintained by Debian Med Packaging Team at
https://salsa.debian.org/med-team/umis
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