[Debian-med-packaging] Bug#935298: python-cogent: Port to Python3 needed

Andreas Tille tille at debian.org
Wed Aug 21 13:13:40 BST 2019


Package: python-cogent
Version: 1.9-14
Severity: normal

The code needs to be ported to Python3.

It might be that there is an official port at

   https://bitbucket.org/pycogent3/cogent3/

and I have opened an issue to clarify this and use release tags there

   https://bitbucket.org/pycogent3/cogent3/issues/18/please-tag-your-releases


-- System Information:
Debian Release: 10.0
  APT prefers testing
  APT policy: (501, 'testing'), (50, 'buildd-unstable'), (50, 'unstable'), (5, 'experimental')
Architecture: amd64 (x86_64)
Foreign Architectures: i386

Kernel: Linux 4.19.0-5-amd64 (SMP w/4 CPU cores)
Locale: LANG=de_DE.UTF-8, LC_CTYPE=de_DE.UTF-8 (charmap=UTF-8), LANGUAGE=de_DE.UTF-8 (charmap=UTF-8)
Shell: /bin/sh linked to /bin/dash
Init: systemd (via /run/systemd/system)
LSM: AppArmor: enabled

Versions of packages python-cogent depends on:
ii  libc6                             2.28-10
ii  python                            2.7.16-1
ii  python-matplotlib                 2.2.3-6
ii  python-numpy [python-numpy-abi9]  1:1.16.2-1

Versions of packages python-cogent recommends:
ii  blast2    1:2.8.1-1
ii  bwa       0.7.17-3
ii  cd-hit    4.6.8-2
ii  clearcut  1.0.9-3
ii  dialign   2.2.1-10
ii  muscle    1:3.8.1551-2

Versions of packages python-cogent suggests:
pn  cdbfasta           <none>
ii  clustalw           2.1+lgpl-6
ii  fasttree           2.1.10-2
ii  infernal           1.1.2-2
ii  mafft              7.407-2
ii  mothur             1.41.21-1
ii  parsinsert         1.04-4
pn  python-cogent-doc  <none>
ii  raxml              8.2.12+dfsg-1
ii  rdp-classifier     2.10.2-4
pn  rtax               <none>

-- no debconf information



More information about the Debian-med-packaging mailing list