[Debian-med-packaging] Bug#944242: Test issues with BioPython 1.75

[Andreas Tille]

Hi Peter,

On Wed, Nov 20, 2019 at 01:36:50PM +0100, Andreas Tille wrote:
> > 
> > https://github.com/biopython/biopython/issues/2350

Since I urgently need Biopython >= 1.74 to fix some other bugs I decided
to try to ignore those issues we discussed here and made sure that build
time tests will not fail.  However the Debian package is also running a
Continuous Integration test (autopkgtest in Debian terminology).  The
test for biopython is basically copying the test files to a temporary dir
and execute the tests[1].

In the attached log I injected a `set -x` and was running:

   sh run-unit-test 2>&1 | tee > tes_suite_errors.out

Unfortunately there are more errors than I expected.  Do you have any
idea why?

Kind regards

     Andreas.


[1] https://salsa.debian.org/med-team/python-biopython/blob/master/debian/tests/run-unit-test

-- 
http://fam-tille.de
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