[Debian-med-packaging] Bug#937838: python-intervaltree-bio: diff for NMU version 1.0.1-3.1

[Andreas Tille]

Hi Sandro,

thanks for the patch and the NMU.  In general this is perfectly
appreciated.  However, I'd recommend to check Git next time.  The
Python2 package was droped in Git - upload was just delayed due to
issues with autopkgtest.

Kind regards

    Andreas.

On Sun, Dec 22, 2019 at 10:38:41PM -0500, Sandro Tosi wrote:
> Control: tags 937838 + patch
> 
> 
> Dear maintainer,
> 
> I've prepared an NMU for python-intervaltree-bio (versioned as 1.0.1-3.1). The diff
> is attached to this message.
> 
> Regards.
> 

> diff -Nru python-intervaltree-bio-1.0.1/debian/changelog python-intervaltree-bio-1.0.1/debian/changelog
> --- python-intervaltree-bio-1.0.1/debian/changelog	2019-01-26 18:10:54.000000000 -0500
> +++ python-intervaltree-bio-1.0.1/debian/changelog	2019-12-22 22:35:33.000000000 -0500
> @@ -1,3 +1,10 @@
> +python-intervaltree-bio (1.0.1-3.1) unstable; urgency=medium
> +
> +  * Non-maintainer upload.
> +  * Drop python2 support; Closes: #937838
> +
> + -- Sandro Tosi <morph at debian.org>  Sun, 22 Dec 2019 22:35:33 -0500
> +
>  python-intervaltree-bio (1.0.1-3) unstable; urgency=medium
>  
>    * Team upload.
> diff -Nru python-intervaltree-bio-1.0.1/debian/control python-intervaltree-bio-1.0.1/debian/control
> --- python-intervaltree-bio-1.0.1/debian/control	2019-01-26 18:10:54.000000000 -0500
> +++ python-intervaltree-bio-1.0.1/debian/control	2019-12-22 22:34:57.000000000 -0500
> @@ -5,30 +5,16 @@
>  Priority: optional
>  Build-Depends: debhelper (>= 12~),
>                 dh-python,
> -               python-all,
> -               python-setuptools,
> -               python-intervaltree,
>                 python3-all,
>                 python3-setuptools,
>                 python3-intervaltree,
>  # Test-Depends:
> -               python-pytest,
>                 python3-pytest
>  Standards-Version: 4.3.0
>  Vcs-Browser: https://salsa.debian.org/med-team/python-intervaltree-bio
>  Vcs-Git: https://salsa.debian.org/med-team/python-intervaltree-bio.git
>  Homepage: https://github.com/konstantint/intervaltree-bio
>  
> -Package: python-intervaltree-bio
> -Architecture: all
> -Depends: ${misc:Depends},
> -         ${python:Depends}
> -Description: Interval tree convenience classes for genomic data -- Python 2 library
> - Convenience classes for loading UCSC genomic annotation records into
> - a set of interval tree data structures.
> - .
> - This package provides the Python 2 library.
> -
>  Package: python3-intervaltree-bio
>  Architecture: all
>  Depends: ${misc:Depends},
> diff -Nru python-intervaltree-bio-1.0.1/debian/rules python-intervaltree-bio-1.0.1/debian/rules
> --- python-intervaltree-bio-1.0.1/debian/rules	2019-01-26 18:10:54.000000000 -0500
> +++ python-intervaltree-bio-1.0.1/debian/rules	2019-12-22 22:35:05.000000000 -0500
> @@ -8,7 +8,7 @@
>  export PYBUILD_NAME=intervaltree-bio
>  
>  %:
> -	dh $@ --with python2,python3 --buildsystem=pybuild
> +	dh $@ --with python3 --buildsystem=pybuild
>  
>  override_dh_auto_test:
>  ifeq (,$(filter nocheck,$(DEB_BUILD_OPTIONS)))
> diff -Nru python-intervaltree-bio-1.0.1/debian/tests/control python-intervaltree-bio-1.0.1/debian/tests/control
> --- python-intervaltree-bio-1.0.1/debian/tests/control	2019-01-26 18:10:54.000000000 -0500
> +++ python-intervaltree-bio-1.0.1/debian/tests/control	2019-12-22 22:35:29.000000000 -0500
> @@ -1,11 +1,4 @@
>  Test-Command:
> -	python2 -m pytest --verbose --datadir debian/data
> -Depends:
> -	python-intervaltree-bio,
> -	python-pytest
> -Restrictions: rw-build-tree
> -
> -Test-Command:
>  	python3 -m pytest --verbose --datadir debian/data
>  Depends:
>  	python3-intervaltree-bio,

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