[Debian-med-packaging] Bug#921789: librostlab-blast: FTBFS (LaTeX error)
Santiago Vila
sanvila at debian.org
Sat Feb 9 00:15:32 GMT 2019
Package: src:librostlab-blast
Version: 1.0.1-9
Severity: serious
Tags: ftbfs
Dear maintainer:
I tried to build this package in buster but it failed:
--------------------------------------------------------------------------------
[...]
debian/rules build-indep
dh build-indep
dh_update_autotools_config -i
dh_autoreconf -i
libtoolize: putting auxiliary files in '.'.
libtoolize: copying file './ltmain.sh'
libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'm4'.
libtoolize: copying file 'm4/libtool.m4'
libtoolize: copying file 'm4/ltoptions.m4'
libtoolize: copying file 'm4/ltsugar.m4'
libtoolize: copying file 'm4/ltversion.m4'
libtoolize: copying file 'm4/lt~obsolete.m4'
configure.ac:7: installing './compile'
configure.ac:5: installing './missing'
[... snipped ...]
LaTeX Warning: Reference `blast-parser-parser_8h' on page 7 undefined on input
line 5.
LaTeX Warning: Reference `blast-parser-position_8h' on page 7 undefined on inpu
t line 6.
LaTeX Warning: Reference `blast-parser-stack_8h' on page 7 undefined on input l
ine 7.
LaTeX Warning: Reference `blast-result_8h' on page 7 undefined on input line 8.
) [7] [8]
Chapter 5.
(./namespacerostlab.tex
(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1phv.fd)
(/usr/share/texlive/texmf-dist/tex/latex/psnfss/t1pcr.fd)
LaTeX Font Warning: Font shape `T1/pcr/bc/n' undefined
(Font) using `T1/pcr/m/n' instead on input line 27.
[9]) (./namespacerostlab_1_1blast.tex [10] [11] [12] [13] [14]
! Missing } inserted.
<inserted text>
}
l.253 \end{DoxyParams}
?
! Emergency stop.
<inserted text>
}
l.253 \end{DoxyParams}
! ==> Fatal error occurred, no output PDF file produced!
Transcript written on refman.log.
mv: cannot stat 'refman.pdf': No such file or directory
make[2]: *** [Makefile:902: ../doxygen-doc/librostlab-blast.pdf] Error 1
make[2]: Leaving directory '/<<PKGBUILDDIR>>/lib'
make[1]: *** [debian/rules:26: override_dh_auto_build] Error 2
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
make: *** [debian/rules:11: build-indep] Error 2
dpkg-buildpackage: error: debian/rules build-indep subprocess returned exit status 2
--------------------------------------------------------------------------------
(The above is just how the build ends and not necessarily the most relevant part)
The build was made in my autobuilder with "dpkg-buildpackage -A"
and it also fails here:
https://tests.reproducible-builds.org/debian/rb-pkg/unstable/amd64/librostlab-blast.html
where you can get a full build log if you need it.
If this is really a bug in one of the build-depends, please use reassign and affects,
so that this is still visible in the BTS web page for this package.
Thanks.
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