[Debian-med-packaging] Bug#919928: [pysam-developers/pysam] Test suite failures (#761)

[Andreas Tille]

On Wed, Feb 20, 2019 at 08:39:02AM +0000, Michael R. Crusoe wrote:
> The difference between the Debian -10 release of htslib v1.9 and the Debian -9 release of htslib is that libdeflate, GCS, and S3 are enabled.
> 
> This even changes the output of `tabix` itself when indexing https://github.com/pysam-developers/pysam/blob/master/tests/tabix_data/example.gtf.gz so it is no surprise that these pysam tests break.

So your suggestion is to generate a new example.gtf.gz to compare with the test result?
If yes, would you mind creating such a file to fix the test suite?
Thanks for your investigation in any case, Andreas.