[Debian-med-packaging] Bug#920545: python-intervaltree breaks python-intervaltree-bio autopkgtest

[Hilko Bengen]

control: tag -1 patch

* Paul Gevers:

> With a recent upload of python-intervaltree the autopkgtest of
> python-intervaltree-bio fails in testing when that autopkgtest is run
> with the binary packages of python-intervaltree from unstable. It passes
> when run with only packages from testing. In tabular form:
>                         pass            fail
> python-intervaltree     from testing    3.0.2-1
> python-intervaltree-bio from testing    1.0.1-2
> all others              from testing    from testing

Oops, my fault, sorry about that. And hooray for autopkgtests, I guess.

Apparently, the .search() method was removed in intervaltree-3.0.

Replacing all instances of .search(B,E) with .overlap(B,E) in the
intervalltree-bio test code makes the tests pass once more. Here's a
patch.

Cheers,
-Hilko
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