[Debian-med-packaging] Latest version of gmap has build issue

[Andreas Tille]

Hi Alex,

I commited latest gmap version to Git but the build runs into

...
gcc -DHAVE_CONFIG_H -I.   -Wdate-time -D_FORTIFY_SOURCE=2  -pthread -DGMAPDB=\"/var/cache/gmap\" -DUTILITYP=1 -g -O2 -fdebug-prefix-map=/build/gmap-2019-01-24=. -fstack-protector-strong -Wformat -Werror=format-security -c -o get_genome-univinterval.o `test -f 'univinterval.c' || echo './'`univinterval.c
bigendian.c:66:1: error: redefinition of 'Bigendian_fwrite_ushort'
 Bigendian_fwrite_ushort (unsigned short value, FILE *fp) {
 ^~~~~~~~~~~~~~~~~~~~~~~
bigendian.c:28:1: note: previous definition of 'Bigendian_fwrite_ushort' was here
 Bigendian_fwrite_ushort (unsigned short value, FILE *fp) {
 ^~~~~~~~~~~~~~~~~~~~~~~
bigendian.c:80:1: error: redefinition of 'Bigendian_fwrite_ushorts'
 Bigendian_fwrite_ushorts (unsigned short *array, int n, FILE *fp) {
 ^~~~~~~~~~~~~~~~~~~~~~~~
bigendian.c:42:1: note: previous definition of 'Bigendian_fwrite_ushorts' was here
 Bigendian_fwrite_ushorts (unsigned short *array, int n, FILE *fp) {
 ^~~~~~~~~~~~~~~~~~~~~~~~


Can you have a look?

Kind regards

       Andreas.

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