[Debian-med-packaging] Bug#931784: nanopolish: Port to Python3 needed

Andreas Tille tille at debian.org
Wed Jul 10 12:10:03 BST 2019


Package: nanopolish
Version: 0.11.0-2
Severity: important

The code needs to be ported to Python3

-- System Information:
Debian Release: 10.0
  APT prefers testing
  APT policy: (501, 'testing'), (50, 'buildd-unstable'), (50, 'unstable'), (5, 'experimental')
Architecture: amd64 (x86_64)
Foreign Architectures: i386

Kernel: Linux 4.19.0-5-amd64 (SMP w/4 CPU cores)
Locale: LANG=de_DE.UTF-8, LC_CTYPE=de_DE.UTF-8 (charmap=UTF-8), LANGUAGE=de_DE.UTF-8 (charmap=UTF-8)
Shell: /bin/sh linked to /bin/dash
Init: systemd (via /run/systemd/system)
LSM: AppArmor: enabled

Versions of packages nanopolish depends on:
ii  libc6        2.28-10
ii  libgcc1      1:8.3.0-6
ii  libgomp1     8.3.0-6
ii  libhdf5-103  1.10.4+repack-10
ii  libhts2      1.9-11
ii  libstdc++6   8.3.0-6
ii  python       2.7.16-1
ii  zlib1g       1:1.2.11.dfsg-1

Versions of packages nanopolish recommends:
ii  python-biopython  1.73+dfsg-1
ii  python-pysam      0.15.2+ds-2

Versions of packages nanopolish suggests:
ii  make  4.2.1-1.2
ii  perl  5.28.1-6

-- no debconf information



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