[Debian-med-packaging] Bug#923772: adapterremoval ftbfs on i386

[Andreas Tille]

Control: tags -1 -buster
Control: found -1 2.2.4-1
Control: forwarded -1 Mikkel Schubert <mikkelsch at gmail.com>
Control: tags -1 upstream

On Tue, Mar 05, 2019 at 10:10:01AM +0100, Matthias Klose wrote:
> Package: src:adapterremoval
> Version: 2.2.4-1
> Severity: serious
> Tags: sid buster
> 
> [...]
> ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
> main is a Catch v2.6.0 host application.
> Run with -? for options
> 
> -------------------------------------------------------------------------------
> Identical nucleotides gets higher qualities
> -------------------------------------------------------------------------------
> tests/unit/alignment_test.cpp:833
> ...............................................................................
> 
> tests/unit/alignment_test.cpp:841: FAILED:
>   REQUIRE( collapsed_result == collapsed_expected )
> with expansion:
>   '@Rec1\nGCATGATATATACAAC\n+\n012345'FBcEFGHIJ\n'
>   ==
>   '@Rec1\nGCATGATATATACAAC\n+\n012345(FBcEFGHIJ\n'

                                       ^----
There seems to be a change in the separator which is strange that it
happens only on i386 architecture while all other architectures are
fine.  I'll discuss this with upstream.

I have marked the bug only for the version in unstable since the issue
does not affect the version in testing.

> -------------------------------------------------------------------------------
> Higher quality nucleotide is selected
> -------------------------------------------------------------------------------
> tests/unit/alignment_test.cpp:857
> ...............................................................................
> 
> tests/unit/alignment_test.cpp:865: FAILED:
>   REQUIRE( collapsed_result == collapsed_expected )
> with expansion:
>   '@Rec1\nGCATGATAATTACAAC\n+\n012345'%5%EFGHIJ\n'
>   ==
>   '@Rec1\nGCATGATAATTACAAC\n+\n012345(%5%EFGHIJ\n'

Same here.

Kind regards

     Andreas. 

-- 
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