[Debian-med-packaging] Bug#945241: ITP: libbio-db-hts-perl -- Perl interface to the HTS library

[Andreas Tille]

Package: wnpp
Severity: wishlist

Subject: ITP: libbio-db-hts-perl -- Perl interface to the HTS library
Package: wnpp
Owner: Andreas Tille <tille at debian.org>
Severity: wishlist

* Package name    : libbio-db-hts-perl
  Version         : 3.01
  Upstream Author : EMBL-European Bioinformatics Institute
* URL             : https://metacpan.org/release/Bio-DB-HTS
* License         : Apache-2.0
  Programming Lang: C
  Description     : Perl interface to the HTS library
 HTSlib is an implementation of a unified C library for accessing common file
 formats, such as SAM (Sequence Alignment/Map), CRAM and VCF (Variant Call
 Format), used for high-throughput sequencing data, and is the core library
 used by samtools and bcftools. HTSlib only depends on zlib. It is known to be
 compatible with gcc, g++ and clang.
 .
 HTSlib implements a generalized BAM (binary SAM) index, with file extension
 'csi' (coordinate-sorted index). The HTSlib file reader first looks for the
 new index and then for the old if the new index is absent.
 .
 This package provides a Perl interface to the HTS library.

Remark: This package is maintained by Debian Med Packaging Team at
   https://salsa.debian.org/med-team/libbio-db-hts-perl