[Debian-med-packaging] Bug#957772: saint: ftbfs with GCC-10

[Matthias Klose]

Package: src:saint
Version: 2.5.0+dfsg-3
Severity: normal
Tags: sid bullseye
User: debian-gcc at lists.debian.org
Usertags: ftbfs-gcc-10

Please keep this issue open in the bug tracker for the package it
was filed for.  If a fix in another package is required, please
file a bug for the other package (or clone), and add a block in this
package. Please keep the issue open until the package can be built in
a follow-up test rebuild.

The package fails to build in a test rebuild on at least amd64 with
gcc-10/g++-10, but succeeds to build with gcc-9/g++-9. The
severity of this report will be raised before the bullseye release,
so nothing has to be done for the buster release.

The full build log can be found at:
http://people.debian.org/~doko/logs/gcc10-20200225/saint_2.5.0+dfsg-3_unstable_gcc10.log
The last lines of the build log are at the end of this report.

To build with GCC 10, either set CC=gcc-10 CXX=g++-10 explicitly,
or install the gcc, g++, gfortran, ... packages from experimental.

  apt-get -t=experimental install g++ 

Common build failures are new warnings resulting in build failures with
-Werror turned on, or new/dropped symbols in Debian symbols files.
For other C/C++ related build failures see the porting guide at
http://gcc.gnu.org/gcc-10/porting_to.html

[...]
/usr/bin/ld: /<<PKGBUILDDIR>>/build/initdata.o:././src/SAINTspc-noctrl/saint.h:246: multiple definition of `iter'; /<<PKGBUILDDIR>>/build/dpalphaIP.o:././src/SAINTspc-noctrl/saint.h:246: first defined here
/usr/bin/ld: /<<PKGBUILDDIR>>/build/initdata.o:././src/SAINTspc-noctrl/saint.h:245: multiple definition of `burn'; /<<PKGBUILDDIR>>/build/dpalphaIP.o:././src/SAINTspc-noctrl/saint.h:245: first defined here
/usr/bin/ld: /<<PKGBUILDDIR>>/build/likelihood.o:././src/SAINTspc-noctrl/saint.h:250: multiple definition of `NORMALIZE'; /<<PKGBUILDDIR>>/build/dpalphaIP.o:././src/SAINTspc-noctrl/saint.h:250: first defined here
/usr/bin/ld: /<<PKGBUILDDIR>>/build/likelihood.o:././src/SAINTspc-noctrl/saint.h:249: multiple definition of `modelvar'; /<<PKGBUILDDIR>>/build/dpalphaIP.o:././src/SAINTspc-noctrl/saint.h:249: first defined here
/usr/bin/ld: /<<PKGBUILDDIR>>/build/likelihood.o:././src/SAINTspc-noctrl/saint.h:248: multiple definition of `freqgroup'; /<<PKGBUILDDIR>>/build/dpalphaIP.o:././src/SAINTspc-noctrl/saint.h:248: first defined here
/usr/bin/ld: /<<PKGBUILDDIR>>/build/likelihood.o:././src/SAINTspc-noctrl/saint.h:247: multiple definition of `freq'; /<<PKGBUILDDIR>>/build/dpalphaIP.o:././src/SAINTspc-noctrl/saint.h:247: first defined here
/usr/bin/ld: /<<PKGBUILDDIR>>/build/likelihood.o:././src/SAINTspc-noctrl/saint.h:246: multiple definition of `iter'; /<<PKGBUILDDIR>>/build/dpalphaIP.o:././src/SAINTspc-noctrl/saint.h:246: first defined here
/usr/bin/ld: /<<PKGBUILDDIR>>/build/likelihood.o:././src/SAINTspc-noctrl/saint.h:245: multiple definition of `burn'; /<<PKGBUILDDIR>>/build/dpalphaIP.o:././src/SAINTspc-noctrl/saint.h:245: first defined here
/usr/bin/ld: /<<PKGBUILDDIR>>/build/mcmc.o:././src/SAINTspc-noctrl/saint.h:250: multiple definition of `NORMALIZE'; /<<PKGBUILDDIR>>/build/dpalphaIP.o:././src/SAINTspc-noctrl/saint.h:250: first defined here
/usr/bin/ld: /<<PKGBUILDDIR>>/build/mcmc.o:././src/SAINTspc-noctrl/saint.h:249: multiple definition of `modelvar'; /<<PKGBUILDDIR>>/build/dpalphaIP.o:././src/SAINTspc-noctrl/saint.h:249: first defined here
/usr/bin/ld: /<<PKGBUILDDIR>>/build/mcmc.o:././src/SAINTspc-noctrl/saint.h:248: multiple definition of `freqgroup'; /<<PKGBUILDDIR>>/build/dpalphaIP.o:././src/SAINTspc-noctrl/saint.h:248: first defined here
/usr/bin/ld: /<<PKGBUILDDIR>>/build/mcmc.o:././src/SAINTspc-noctrl/saint.h:247: multiple definition of `freq'; /<<PKGBUILDDIR>>/build/dpalphaIP.o:././src/SAINTspc-noctrl/saint.h:247: first defined here
/usr/bin/ld: /<<PKGBUILDDIR>>/build/mcmc.o:././src/SAINTspc-noctrl/saint.h:246: multiple definition of `iter'; /<<PKGBUILDDIR>>/build/dpalphaIP.o:././src/SAINTspc-noctrl/saint.h:246: first defined here
/usr/bin/ld: /<<PKGBUILDDIR>>/build/mcmc.o:././src/SAINTspc-noctrl/saint.h:245: multiple definition of `burn'; /<<PKGBUILDDIR>>/build/dpalphaIP.o:././src/SAINTspc-noctrl/saint.h:245: first defined here
/usr/bin/ld: /<<PKGBUILDDIR>>/build/meancounts.o:././src/SAINTspc-noctrl/saint.h:250: multiple definition of `NORMALIZE'; /<<PKGBUILDDIR>>/build/dpalphaIP.o:././src/SAINTspc-noctrl/saint.h:250: first defined here
/usr/bin/ld: /<<PKGBUILDDIR>>/build/meancounts.o:././src/SAINTspc-noctrl/saint.h:249: multiple definition of `modelvar'; /<<PKGBUILDDIR>>/build/dpalphaIP.o:././src/SAINTspc-noctrl/saint.h:249: first defined here
/usr/bin/ld: /<<PKGBUILDDIR>>/build/meancounts.o:././src/SAINTspc-noctrl/saint.h:248: multiple definition of `freqgroup'; /<<PKGBUILDDIR>>/build/dpalphaIP.o:././src/SAINTspc-noctrl/saint.h:248: first defined here
/usr/bin/ld: /<<PKGBUILDDIR>>/build/meancounts.o:././src/SAINTspc-noctrl/saint.h:247: multiple definition of `freq'; /<<PKGBUILDDIR>>/build/dpalphaIP.o:././src/SAINTspc-noctrl/saint.h:247: first defined here
/usr/bin/ld: /<<PKGBUILDDIR>>/build/meancounts.o:././src/SAINTspc-noctrl/saint.h:246: multiple definition of `iter'; /<<PKGBUILDDIR>>/build/dpalphaIP.o:././src/SAINTspc-noctrl/saint.h:246: first defined here
/usr/bin/ld: /<<PKGBUILDDIR>>/build/meancounts.o:././src/SAINTspc-noctrl/saint.h:245: multiple definition of `burn'; /<<PKGBUILDDIR>>/build/dpalphaIP.o:././src/SAINTspc-noctrl/saint.h:245: first defined here
/usr/bin/ld: /<<PKGBUILDDIR>>/build/mmath.o:././src/SAINTspc-noctrl/saint.h:250: multiple definition of `NORMALIZE'; /<<PKGBUILDDIR>>/build/dpalphaIP.o:././src/SAINTspc-noctrl/saint.h:250: first defined here
/usr/bin/ld: /<<PKGBUILDDIR>>/build/mmath.o:././src/SAINTspc-noctrl/saint.h:249: multiple definition of `modelvar'; /<<PKGBUILDDIR>>/build/dpalphaIP.o:././src/SAINTspc-noctrl/saint.h:249: first defined here
/usr/bin/ld: /<<PKGBUILDDIR>>/build/mmath.o:././src/SAINTspc-noctrl/saint.h:248: multiple definition of `freqgroup'; /<<PKGBUILDDIR>>/build/dpalphaIP.o:././src/SAINTspc-noctrl/saint.h:248: first defined here
/usr/bin/ld: /<<PKGBUILDDIR>>/build/mmath.o:././src/SAINTspc-noctrl/saint.h:247: multiple definition of `freq'; /<<PKGBUILDDIR>>/build/dpalphaIP.o:././src/SAINTspc-noctrl/saint.h:247: first defined here
/usr/bin/ld: /<<PKGBUILDDIR>>/build/mmath.o:././src/SAINTspc-noctrl/saint.h:246: multiple definition of `iter'; /<<PKGBUILDDIR>>/build/dpalphaIP.o:././src/SAINTspc-noctrl/saint.h:246: first defined here
/usr/bin/ld: /<<PKGBUILDDIR>>/build/mmath.o:././src/SAINTspc-noctrl/saint.h:245: multiple definition of `burn'; /<<PKGBUILDDIR>>/build/dpalphaIP.o:././src/SAINTspc-noctrl/saint.h:245: first defined here
/usr/bin/ld: /<<PKGBUILDDIR>>/build/printmap.o:././src/SAINTspc-noctrl/saint.h:250: multiple definition of `NORMALIZE'; /<<PKGBUILDDIR>>/build/dpalphaIP.o:././src/SAINTspc-noctrl/saint.h:250: first defined here
/usr/bin/ld: /<<PKGBUILDDIR>>/build/printmap.o:././src/SAINTspc-noctrl/saint.h:249: multiple definition of `modelvar'; /<<PKGBUILDDIR>>/build/dpalphaIP.o:././src/SAINTspc-noctrl/saint.h:249: first defined here
/usr/bin/ld: /<<PKGBUILDDIR>>/build/printmap.o:././src/SAINTspc-noctrl/saint.h:248: multiple definition of `freqgroup'; /<<PKGBUILDDIR>>/build/dpalphaIP.o:././src/SAINTspc-noctrl/saint.h:248: first defined here
/usr/bin/ld: /<<PKGBUILDDIR>>/build/printmap.o:././src/SAINTspc-noctrl/saint.h:247: multiple definition of `freq'; /<<PKGBUILDDIR>>/build/dpalphaIP.o:././src/SAINTspc-noctrl/saint.h:247: first defined here
/usr/bin/ld: /<<PKGBUILDDIR>>/build/printmap.o:././src/SAINTspc-noctrl/saint.h:246: multiple definition of `iter'; /<<PKGBUILDDIR>>/build/dpalphaIP.o:././src/SAINTspc-noctrl/saint.h:246: first defined here
/usr/bin/ld: /<<PKGBUILDDIR>>/build/printmap.o:././src/SAINTspc-noctrl/saint.h:245: multiple definition of `burn'; /<<PKGBUILDDIR>>/build/dpalphaIP.o:././src/SAINTspc-noctrl/saint.h:245: first defined here
/usr/bin/ld: /<<PKGBUILDDIR>>/build/result.o:././src/SAINTspc-noctrl/saint.h:250: multiple definition of `NORMALIZE'; /<<PKGBUILDDIR>>/build/dpalphaIP.o:././src/SAINTspc-noctrl/saint.h:250: first defined here
/usr/bin/ld: /<<PKGBUILDDIR>>/build/result.o:././src/SAINTspc-noctrl/saint.h:249: multiple definition of `modelvar'; /<<PKGBUILDDIR>>/build/dpalphaIP.o:././src/SAINTspc-noctrl/saint.h:249: first defined here
/usr/bin/ld: /<<PKGBUILDDIR>>/build/result.o:././src/SAINTspc-noctrl/saint.h:248: multiple definition of `freqgroup'; /<<PKGBUILDDIR>>/build/dpalphaIP.o:././src/SAINTspc-noctrl/saint.h:248: first defined here
/usr/bin/ld: /<<PKGBUILDDIR>>/build/result.o:././src/SAINTspc-noctrl/saint.h:247: multiple definition of `freq'; /<<PKGBUILDDIR>>/build/dpalphaIP.o:././src/SAINTspc-noctrl/saint.h:247: first defined here
/usr/bin/ld: /<<PKGBUILDDIR>>/build/result.o:././src/SAINTspc-noctrl/saint.h:246: multiple definition of `iter'; /<<PKGBUILDDIR>>/build/dpalphaIP.o:././src/SAINTspc-noctrl/saint.h:246: first defined here
/usr/bin/ld: /<<PKGBUILDDIR>>/build/result.o:././src/SAINTspc-noctrl/saint.h:245: multiple definition of `burn'; /<<PKGBUILDDIR>>/build/dpalphaIP.o:././src/SAINTspc-noctrl/saint.h:245: first defined here
/usr/bin/ld: /<<PKGBUILDDIR>>/build/saint.o:././src/SAINTspc-noctrl/saint.h:245: multiple definition of `burn'; /<<PKGBUILDDIR>>/build/dpalphaIP.o:././src/SAINTspc-noctrl/saint.h:245: first defined here
/usr/bin/ld: /<<PKGBUILDDIR>>/build/saint.o:././src/SAINTspc-noctrl/saint.h:246: multiple definition of `iter'; /<<PKGBUILDDIR>>/build/dpalphaIP.o:././src/SAINTspc-noctrl/saint.h:246: first defined here
/usr/bin/ld: /<<PKGBUILDDIR>>/build/saint.o:././src/SAINTspc-noctrl/saint.h:247: multiple definition of `freq'; /<<PKGBUILDDIR>>/build/dpalphaIP.o:././src/SAINTspc-noctrl/saint.h:247: first defined here
/usr/bin/ld: /<<PKGBUILDDIR>>/build/saint.o:././src/SAINTspc-noctrl/saint.h:248: multiple definition of `freqgroup'; /<<PKGBUILDDIR>>/build/dpalphaIP.o:././src/SAINTspc-noctrl/saint.h:248: first defined here
/usr/bin/ld: /<<PKGBUILDDIR>>/build/saint.o:././src/SAINTspc-noctrl/saint.h:249: multiple definition of `modelvar'; /<<PKGBUILDDIR>>/build/dpalphaIP.o:././src/SAINTspc-noctrl/saint.h:249: first defined here
/usr/bin/ld: /<<PKGBUILDDIR>>/build/saint.o:././src/SAINTspc-noctrl/saint.h:250: multiple definition of `NORMALIZE'; /<<PKGBUILDDIR>>/build/dpalphaIP.o:././src/SAINTspc-noctrl/saint.h:250: first defined here
/usr/bin/ld: /<<PKGBUILDDIR>>/build/setparam.o:././src/SAINTspc-noctrl/saint.h:250: multiple definition of `NORMALIZE'; /<<PKGBUILDDIR>>/build/dpalphaIP.o:././src/SAINTspc-noctrl/saint.h:250: first defined here
/usr/bin/ld: /<<PKGBUILDDIR>>/build/setparam.o:././src/SAINTspc-noctrl/saint.h:249: multiple definition of `modelvar'; /<<PKGBUILDDIR>>/build/dpalphaIP.o:././src/SAINTspc-noctrl/saint.h:249: first defined here
/usr/bin/ld: /<<PKGBUILDDIR>>/build/setparam.o:././src/SAINTspc-noctrl/saint.h:248: multiple definition of `freqgroup'; /<<PKGBUILDDIR>>/build/dpalphaIP.o:././src/SAINTspc-noctrl/saint.h:248: first defined here
/usr/bin/ld: /<<PKGBUILDDIR>>/build/setparam.o:././src/SAINTspc-noctrl/saint.h:247: multiple definition of `freq'; /<<PKGBUILDDIR>>/build/dpalphaIP.o:././src/SAINTspc-noctrl/saint.h:247: first defined here
/usr/bin/ld: /<<PKGBUILDDIR>>/build/setparam.o:././src/SAINTspc-noctrl/saint.h:246: multiple definition of `iter'; /<<PKGBUILDDIR>>/build/dpalphaIP.o:././src/SAINTspc-noctrl/saint.h:246: first defined here
/usr/bin/ld: /<<PKGBUILDDIR>>/build/setparam.o:././src/SAINTspc-noctrl/saint.h:245: multiple definition of `burn'; /<<PKGBUILDDIR>>/build/dpalphaIP.o:././src/SAINTspc-noctrl/saint.h:245: first defined here
/usr/bin/ld: /<<PKGBUILDDIR>>/build/setprior.o:././src/SAINTspc-noctrl/saint.h:250: multiple definition of `NORMALIZE'; /<<PKGBUILDDIR>>/build/dpalphaIP.o:././src/SAINTspc-noctrl/saint.h:250: first defined here
/usr/bin/ld: /<<PKGBUILDDIR>>/build/setprior.o:././src/SAINTspc-noctrl/saint.h:249: multiple definition of `modelvar'; /<<PKGBUILDDIR>>/build/dpalphaIP.o:././src/SAINTspc-noctrl/saint.h:249: first defined here
/usr/bin/ld: /<<PKGBUILDDIR>>/build/setprior.o:././src/SAINTspc-noctrl/saint.h:248: multiple definition of `freqgroup'; /<<PKGBUILDDIR>>/build/dpalphaIP.o:././src/SAINTspc-noctrl/saint.h:248: first defined here
/usr/bin/ld: /<<PKGBUILDDIR>>/build/setprior.o:././src/SAINTspc-noctrl/saint.h:247: multiple definition of `freq'; /<<PKGBUILDDIR>>/build/dpalphaIP.o:././src/SAINTspc-noctrl/saint.h:247: first defined here
/usr/bin/ld: /<<PKGBUILDDIR>>/build/setprior.o:././src/SAINTspc-noctrl/saint.h:246: multiple definition of `iter'; /<<PKGBUILDDIR>>/build/dpalphaIP.o:././src/SAINTspc-noctrl/saint.h:246: first defined here
/usr/bin/ld: /<<PKGBUILDDIR>>/build/setprior.o:././src/SAINTspc-noctrl/saint.h:245: multiple definition of `burn'; /<<PKGBUILDDIR>>/build/dpalphaIP.o:././src/SAINTspc-noctrl/saint.h:245: first defined here
/usr/bin/ld: /<<PKGBUILDDIR>>/build/setsummary.o:././src/SAINTspc-noctrl/saint.h:250: multiple definition of `NORMALIZE'; /<<PKGBUILDDIR>>/build/dpalphaIP.o:././src/SAINTspc-noctrl/saint.h:250: first defined here
/usr/bin/ld: /<<PKGBUILDDIR>>/build/setsummary.o:././src/SAINTspc-noctrl/saint.h:249: multiple definition of `modelvar'; /<<PKGBUILDDIR>>/build/dpalphaIP.o:././src/SAINTspc-noctrl/saint.h:249: first defined here
/usr/bin/ld: /<<PKGBUILDDIR>>/build/setsummary.o:././src/SAINTspc-noctrl/saint.h:248: multiple definition of `freqgroup'; /<<PKGBUILDDIR>>/build/dpalphaIP.o:././src/SAINTspc-noctrl/saint.h:248: first defined here
/usr/bin/ld: /<<PKGBUILDDIR>>/build/setsummary.o:././src/SAINTspc-noctrl/saint.h:247: multiple definition of `freq'; /<<PKGBUILDDIR>>/build/dpalphaIP.o:././src/SAINTspc-noctrl/saint.h:247: first defined here
/usr/bin/ld: /<<PKGBUILDDIR>>/build/setsummary.o:././src/SAINTspc-noctrl/saint.h:246: multiple definition of `iter'; /<<PKGBUILDDIR>>/build/dpalphaIP.o:././src/SAINTspc-noctrl/saint.h:246: first defined here
/usr/bin/ld: /<<PKGBUILDDIR>>/build/setsummary.o:././src/SAINTspc-noctrl/saint.h:245: multiple definition of `burn'; /<<PKGBUILDDIR>>/build/dpalphaIP.o:././src/SAINTspc-noctrl/saint.h:245: first defined here
collect2: error: ld returned 1 exit status
make[2]: *** [Makefile:63: saint-spc-noctrl] Error 1
make[2]: Leaving directory '/<<PKGBUILDDIR>>'
dh_auto_build: error: make -j1 "INSTALL=install --strip-program=true" all "CFLAGS=-Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now" returned exit code 2
make[1]: *** [debian/rules:10: override_dh_auto_build] Error 25
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
make: *** [debian/rules:6: build] Error 2
dpkg-buildpackage: error: debian/rules build subprocess returned exit status 2