[Debian-med-packaging] Bug#958459: ITP: pycoqc -- computes metrics and generates Interactive QC plots

Andreas Tille tille at debian.org
Wed Apr 22 11:43:37 BST 2020


Package: wnpp
Severity: wishlist

Subject: ITP: pycoqc -- computes metrics and generates Interactive QC plots
Package: wnpp
Owner: Andreas Tille <tille at debian.org>
Severity: wishlist

* Package name    : pycoqc
  Version         : 2.5.0.21
  Upstream Author : Copyright: Copyright 2019 Adrien Leger & Tommaso Leonardi
* URL             : https://github.com/a-slide/pycoQC
* License         : GPL-3+
  Programming Lang: Python
  Description     : computes metrics and generates Interactive QC plots
 PycoQC computes metrics and generates interactive QC plots for Oxford
 Nanopore technologies sequencing data
 .
 PycoQC relies on the sequencing_summary.txt file generated by Albacore
 and Guppy, but if needed it can also generates a summary file from
 basecalled fast5 files. The package supports 1D and 1D2 runs generated
 with Minion, Gridion and Promethion devices and basecalled with Albacore
 1.2.1+ or Guppy 2.1.3+

Remark: This package is maintained by Debian Med Packaging Team at
   https://salsa.debian.org/med-team/pycoqc



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