[Debian-med-packaging] Bug#978032: python-cobra: autopkgtest regression in testing

[Graham Inggs]

Source: python-cobra
Version: 0.19.0-1
Severity: serious
Tags: sid bullseye
X-Debbugs-CC: debian-ci at lists.debian.org
User: debian-ci at lists.debian.org
Usertags: regression

Hi Maintainer

The autopkgtests of python-cobra recently started to fail in testing [1].
I've copied what I hope is the relevant part of the log below.

Regards
Graham


[1] https://ci.debian.net/packages/p/python-cobra/testing/amd64/


==================================== ERRORS ====================================
______________ ERROR at setup of TestManipulation.test_escape_ids ______________

filename = '/usr/lib/python3/dist-packages/cobra/test/data/textbook.xml.gz'
number = <class 'float'>
f_replace = {'F_GENE': <function _f_gene at 0x7f75f8c3cc10>,
'F_GENE_REV': <function _f_gene_rev at 0x7f75f8c3cca0>, 'F_GROUP':
<function _f_group at 0x7f75f8c3cf70>, 'F_GROUP_REV': <function
_f_group_rev at 0x7f75f8531040>, ...}
kwargs = {}
doc = <libsbml.SBMLDocument; proxy of <Swig Object of type
'SBMLDocument *' at 0x7f75f402cc60> >
cobra_error = CobraSBMLError('Something went wrong reading the SBML
model. Most likely the SBML model is not valid. Please check
tha...ame)`\nIf the model is valid and cannot be read please open an
issue at https://github.com/opencobra/cobrapy/issues .')