[Debian-med-packaging] Bug#948654: ITP: thesias -- Testing Haplotype Effects In Association Studies

[Dylan Aïssi]

Package: wnpp
Owner: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
Severity: wishlist

Package name: thesias
Upstream Author : David-Alexandre Trégouët
URL: https://github.com/daissi/thesias
License: GPL-3+
Description: Testing Haplotype Effects In Association Studies
 The objectif of the THESIAS program is to performed haplotype-based
 association analysis in unrelated individuals. This program is based
 on the maximum likelihood model described in Tregouet et al. 2002
 (Hum Mol Genet 2002,11: 2015-2023) and is linked to the SEM algorithm
 (Tregouet et al. Ann Hum Genet 2004,68: 165-177).
 THESIAS allows one to simultaneous estimate haplotype frequencies
 and their associate effects on the phenotype of interest.
 In this new THESIAS release, quantitative, qualitative (logistic
 and matched-pair analysis), categorical and survival outcomes can be
 studied. X-linked haplotype analysis is also feasible.
 Covariate-adjusted haplotype effects as well as haplotype x covariate
 interactions can also be investigated.

This package will be maintained by the Debian Med Packaging Team at:
https://salsa.debian.org/med-team/thesias