[Debian-med-packaging] Bug#964202: ITP: mecat2 -- ultra-fast and accurate de novo assembly tools for SMRT reads

Shayan Doust hello at shayandoust.me
Fri Jul 3 16:42:26 BST 2020


Package: wnpp
Severity: wishlist

Subject: ITP: mecat2 -- ultra-fast and accurate de novo assembly tools for SMRT reads
Package: wnpp
Owner: Shayan Doust <hello at shayandoust.me>
Severity: wishlist

* Package name    : mecat2
  Version         : 0.0+git20200428.f54c542
  Upstream Author : Chuan-Le Xiao
* URL             : https://github.com/xiaochuanle/MECAT2
* License         : GPL-3
  Programming Lang: C
  Description     : ultra-fast and accurate de novo assembly tools for SMRT reads
 An improved version of MECAT. It is an ultra-fast and accurate mapping
 and error correcting de novo assembly tools for single molecula
 sequencing (SMRT) reads. MECAT2 consists of the following three modules:
  1. mecat2map: a fast and accurate alignment tool for SMRT reads.
  2. mecat2cns: correct noisy reads based on their pairwise overlaps.
  3. fsa: a string graph based assembly tool.

Remark: This package is maintained by Debian Med Packaging Team at
   https://salsa.debian.org/med-team/mecat2



More information about the Debian-med-packaging mailing list