[Debian-med-packaging] Bug#964345: ITP: nanoplot -- plotting scripts for long read sequencing data

Steffen Moeller moeller at debian.org
Sun Jul 5 21:18:01 BST 2020


Package: wnpp
Severity: wishlist

Subject: ITP: nanoplot -- plotting scripts for long read sequencing data
Package: wnpp
Owner: Steffen Moeller <moeller at debian.org>
Severity: wishlist

* Package name    : nanoplot
  Version         : 1.30.1
  Upstream Author : Wouter De Coster
* URL             : https://github.com/wdecoster/NanoPlot
* License         : MIT
  Programming Lang: Python
  Description     : plotting scripts for long read sequencing data
 NanoPlot provides plotting scripts for long read sequencing data.
 .
 These scripts perform data extraction from Oxford Nanopore sequencing data
 in the following formats:
 .
  * fastq files (optionally compressed)
  * fastq files generated by albacore, guppy or MinKNOW containing additional
    information (optionally compressed)
  * sorted bam files
  * sequencing_summary.txt output table generated by albacore, guppy or
    MinKnow basecalling (optionally compressed)
  * fasta files (optionally compressed)
  * multiple files of the same type can be offered simultaneously

Remark: This package is maintained by Debian Med Packaging Team at
   https://salsa.debian.org/med-team/nanoplot



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