[Debian-med-packaging] Bug#964345: ITP: nanoplot -- plotting scripts for long read sequencing data
Steffen Moeller
moeller at debian.org
Sun Jul 5 21:18:01 BST 2020
Package: wnpp
Severity: wishlist
Subject: ITP: nanoplot -- plotting scripts for long read sequencing data
Package: wnpp
Owner: Steffen Moeller <moeller at debian.org>
Severity: wishlist
* Package name : nanoplot
Version : 1.30.1
Upstream Author : Wouter De Coster
* URL : https://github.com/wdecoster/NanoPlot
* License : MIT
Programming Lang: Python
Description : plotting scripts for long read sequencing data
NanoPlot provides plotting scripts for long read sequencing data.
.
These scripts perform data extraction from Oxford Nanopore sequencing data
in the following formats:
.
* fastq files (optionally compressed)
* fastq files generated by albacore, guppy or MinKNOW containing additional
information (optionally compressed)
* sorted bam files
* sequencing_summary.txt output table generated by albacore, guppy or
MinKnow basecalling (optionally compressed)
* fasta files (optionally compressed)
* multiple files of the same type can be offered simultaneously
Remark: This package is maintained by Debian Med Packaging Team at
https://salsa.debian.org/med-team/nanoplot
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