[Debian-med-packaging] Bug#964650: pydicom: FTBFS: dh_auto_test: error: pybuild --test --test-pytest -i python{version} -p 3.8 returned exit code 13
Lucas Nussbaum
lucas at debian.org
Thu Jul 9 12:27:37 BST 2020
Source: pydicom
Version: 1.4.1-1
Severity: serious
Justification: FTBFS on amd64
Tags: bullseye sid ftbfs
Usertags: ftbfs-20200709 ftbfs-bullseye
Hi,
During a rebuild of all packages in sid, your package failed to build
on amd64.
Relevant part (hopefully):
> make[1]: Entering directory '/<<PKGBUILDDIR>>'
> dh_auto_build
> pybuild --build --test-pytest -i python{version} -p 3.8
> I: pybuild base:217: /usr/bin/python3 setup.py build
> running build
> running build_py
> copying dicom.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom
> copying pydicom/filereader.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom
> copying pydicom/errors.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom
> copying pydicom/_dicom_dict.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom
> copying pydicom/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom
> copying pydicom/uid.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom
> copying pydicom/filebase.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom
> copying pydicom/multival.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom
> copying pydicom/misc.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom
> copying pydicom/dataelem.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom
> copying pydicom/dicomio.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom
> copying pydicom/_uid_dict.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom
> copying pydicom/compat.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom
> copying pydicom/_version.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom
> copying pydicom/tag.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom
> copying pydicom/jsonrep.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom
> copying pydicom/dataset.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom
> copying pydicom/values.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom
> copying pydicom/config.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom
> copying pydicom/sequence.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom
> copying pydicom/filewriter.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom
> copying pydicom/_private_dict.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom
> copying pydicom/datadict.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom
> copying pydicom/valuerep.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom
> copying pydicom/fileutil.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom
> copying pydicom/_storage_sopclass_uids.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom
> copying pydicom/charset.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom
> copying pydicom/encaps.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom
> copying pydicom/dicomdir.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/pixel_data_handlers
> copying pydicom/pixel_data_handlers/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/pixel_data_handlers
> copying pydicom/pixel_data_handlers/util.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/pixel_data_handlers
> copying pydicom/pixel_data_handlers/jpeg_ls_handler.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/pixel_data_handlers
> copying pydicom/pixel_data_handlers/numpy_handler.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/pixel_data_handlers
> copying pydicom/pixel_data_handlers/pillow_handler.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/pixel_data_handlers
> copying pydicom/pixel_data_handlers/gdcm_handler.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/pixel_data_handlers
> copying pydicom/pixel_data_handlers/rle_handler.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/pixel_data_handlers
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/overlay_data_handlers
> copying pydicom/overlay_data_handlers/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/overlay_data_handlers
> copying pydicom/overlay_data_handlers/numpy_handler.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/overlay_data_handlers
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/util
> copying pydicom/util/leanread.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/util
> copying pydicom/util/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/util
> copying pydicom/util/fixes.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/util
> copying pydicom/util/hexutil.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/util
> copying pydicom/util/fixer.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/util
> copying pydicom/util/dump.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/util
> copying pydicom/util/codify.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/util
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/benchmarks
> copying pydicom/benchmarks/bench_encaps.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/benchmarks
> copying pydicom/benchmarks/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/benchmarks
> copying pydicom/benchmarks/bench_handler_numpy.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/benchmarks
> copying pydicom/benchmarks/bench_handler_rle_encode.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/benchmarks
> copying pydicom/benchmarks/bench_pixel_util.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/benchmarks
> copying pydicom/benchmarks/bench_handler_rle_decode.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/benchmarks
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data
> copying pydicom/data/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data
> copying pydicom/data/data_manager.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/tests
> copying pydicom/tests/test_coding.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/tests
> copying pydicom/tests/test_filereader.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/tests
> copying pydicom/tests/test_numpy_pixel_data.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/tests
> copying pydicom/tests/test_uid.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/tests
> copying pydicom/tests/test_unicode.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/tests
> copying pydicom/tests/test_jpeg_ls_pixel_data.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/tests
> copying pydicom/tests/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/tests
> copying pydicom/tests/test_util.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/tests
> copying pydicom/tests/test_sequence.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/tests
> copying pydicom/tests/test_gdcm_pixel_data.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/tests
> copying pydicom/tests/test_handler_util.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/tests
> copying pydicom/tests/test_values.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/tests
> copying pydicom/tests/test_charset.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/tests
> copying pydicom/tests/test_config.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/tests
> copying pydicom/tests/test_filebase.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/tests
> copying pydicom/tests/test_codedict.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/tests
> copying pydicom/tests/test_misc.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/tests
> copying pydicom/tests/test_JPEG_LS_transfer_syntax.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/tests
> copying pydicom/tests/test_dataelem.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/tests
> copying pydicom/tests/test_rawread.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/tests
> copying pydicom/tests/test_data_manager.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/tests
> copying pydicom/tests/_write_stds.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/tests
> copying pydicom/tests/test_dicomdir.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/tests
> copying pydicom/tests/test_filewriter.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/tests
> copying pydicom/tests/test_environment.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/tests
> copying pydicom/tests/test_dictionary.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/tests
> copying pydicom/tests/_handler_common.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/tests
> copying pydicom/tests/test_multival.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/tests
> copying pydicom/tests/test_errors.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/tests
> copying pydicom/tests/test_tag.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/tests
> copying pydicom/tests/test_json.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/tests
> copying pydicom/tests/test_compat.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/tests
> copying pydicom/tests/test_valuerep.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/tests
> copying pydicom/tests/test_rle_pixel_data.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/tests
> copying pydicom/tests/test_pillow_pixel_data.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/tests
> copying pydicom/tests/test_fixes.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/tests
> copying pydicom/tests/test_overlay_np.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/tests
> copying pydicom/tests/test_dataset.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/tests
> copying pydicom/tests/test_encaps.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/tests
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/sr
> copying pydicom/sr/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/sr
> copying pydicom/sr/_snomed_dict.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/sr
> copying pydicom/sr/codedict.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/sr
> copying pydicom/sr/_cid_dict.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/sr
> copying pydicom/sr/coding.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/sr
> copying pydicom/sr/_concepts_dict.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/sr
> running egg_info
> creating pydicom.egg-info
> writing pydicom.egg-info/PKG-INFO
> writing dependency_links to pydicom.egg-info/dependency_links.txt
> writing top-level names to pydicom.egg-info/top_level.txt
> writing manifest file 'pydicom.egg-info/SOURCES.txt'
> reading manifest file 'pydicom.egg-info/SOURCES.txt'
> reading manifest template 'MANIFEST.in'
> writing manifest file 'pydicom.egg-info/SOURCES.txt'
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/charset_files
> copying pydicom/data/charset_files/chrKoreanMulti.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/charset_files
> copying pydicom/data/charset_files/chrFrenMulti.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/charset_files
> copying pydicom/data/charset_files/chrSQEncoding1.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/charset_files
> copying pydicom/data/charset_files/chrArab.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/charset_files
> copying pydicom/data/charset_files/chrI2.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/charset_files
> copying pydicom/data/charset_files/chrGerm.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/charset_files
> copying pydicom/data/charset_files/chrH31.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/charset_files
> copying pydicom/data/charset_files/chrRuss.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/charset_files
> copying pydicom/data/charset_files/chrJapMultiExplicitIR6.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/charset_files
> copying pydicom/data/charset_files/chrHbrw.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/charset_files
> copying pydicom/data/charset_files/chrJapMulti.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/charset_files
> copying pydicom/data/charset_files/chrX1.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/charset_files
> copying pydicom/data/charset_files/chrFren.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/charset_files
> copying pydicom/data/charset_files/chrGreek.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/charset_files
> copying pydicom/data/charset_files/chrH32.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/charset_files
> copying pydicom/data/charset_files/chrSQEncoding.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/charset_files
> copying pydicom/data/charset_files/chrX2.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/charset_files
> copying pydicom/data/charset_files/FileInfo.txt -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/charset_files
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/palettes
> copying pydicom/data/palettes/winter.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/palettes
> copying pydicom/data/palettes/summer.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/palettes
> copying pydicom/data/palettes/spring.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/palettes
> copying pydicom/data/palettes/README.md -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/palettes
> copying pydicom/data/palettes/pet.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/palettes
> copying pydicom/data/palettes/fall.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/palettes
> copying pydicom/data/palettes/pet20step.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/palettes
> copying pydicom/data/palettes/hotiron.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/palettes
> copying pydicom/data/palettes/hotmetalblue.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/palettes
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/rtdose_rle_1frame.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/RG3_UNCI.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/nested_priv_SQ.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/JPEG-LL.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/liver_1frame.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/RG1_UNCR.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/rtstruct.dump -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/color3d_jpeg_baseline.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/RG1_J2KR.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/MR_small_implicit.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/MR2_J2KI.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/OBXXXX1A_rle.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/emri_small_RLE.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/meta_missing_tsyntax.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/CT_small.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/JPEG-lossy.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/SC_rgb_expb_16bit.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/MR2_J2KR.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/liver.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/SC_rgb_32bit_2frame.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/rtdose_1frame.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/SC_rgb.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/RG3_UNCR.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/SC_rgb_jpeg_gdcm.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/SC_ybr_full_422_uncompressed.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/SC_rgb_small_odd_jpeg.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/SC_rgb_dcmtk_ebcyn2_dcmd.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/rtdose_rle.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/rtdose.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/MR2_UNCR.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/MR_small_jp2klossless.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/693_UNCI.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/SC_rgb_gdcm_KY.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/SC_rgb_jpeg_lossy_gdcm.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/JPEG2000.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/color-pl.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/SC_rgb_16bit_2frame.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/rtdose_expb.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/emri_small_jpeg_2k_lossless.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/reportsi.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/SC_rgb_expb_2frame.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/gdcm-US-ALOKA-16.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/SC_rgb_dcmtk_+eb+cy+np.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/SC_rgb_expb_32bit_2frame.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/JPEG2000_UNC.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/explicit_VR-UN.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/SC_rgb_dcmtk_+eb+cy+s4.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/US1_J2KI.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/SC_rgb_expb_16bit_2frame.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/OBXXXX1A_rle_2frame.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/ExplVR_BigEnd.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/emri_small_jpeg_ls_lossless.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/SC_rgb_dcmtk_+eb+cy+n2.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/RG1_J2KI.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/693_UNCR.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/OBXXXX1A_2frame.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/MR-SIEMENS-DICOM-WithOverlays.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/rtdose_expb_1frame.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/SC_rgb_rle_32bit_2frame.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/RG1_UNCI.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/RG3_J2KI.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/rtplan.dump -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/gdcm-US-ALOKA-16_big.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/SC_rgb_2frame.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/OBXXXX1A_expb_2frame.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/OBXXXX1A_expb.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/rtplan_truncated.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/693_J2KR.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/MR_small_bigendian.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/SC_rgb_rle_2frame.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/MR_small_RLE.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/MR_small_padded.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/US1_UNCR.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/SC_rgb_dcmtk_+eb+cy+n1.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/MR_small.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/ExplVR_BigEndNoMeta.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/rtplan.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/liver_expb.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/reportsi_with_empty_number_tags.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/SC_rgb_dcmtk_ebcynp_dcmd.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/SC_rgb_dcmtk_ebcys2_dcmd.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/OT-PAL-8-face.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/README.txt -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/SC_rgb_rle_16bit.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/MR_small_expb.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/SC_rgb_expb_32bit.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/no_meta_group_length.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/test_PN.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/emri_small.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/priv_SQ.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/US1_J2KR.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/SC_rgb_32bit.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/SC_rgb_rle_16bit_2frame.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/SC_rgb_dcmtk_+eb+cy+s2.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/SC_rgb_dcmtk_ebcyn1_dcmd.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/OBXXXX1A.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/RG3_J2KR.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/MR_truncated.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/emri_small_jpeg_2k_lossless_too_short.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/no_meta.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/MR2_UNCI.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/SC_rgb_dcmtk_ebcr_dcmd.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/SC_rgb_rle_32bit.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/SC_rgb_jpeg_dcmtk.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/SC_ybr_full_uncompressed.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/US1_UNCI.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/SC_rgb_gdcm2k_uncompressed.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/SC_rgb_rle.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/eCT_Supplemental.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/SC_rgb_small_odd.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/ExplVR_LitEndNoMeta.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/emri_small_big_endian.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/SC_rgb_dcmtk_+eb+cr.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/vlut_04.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/zipMR.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/test1.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/image_dfl.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/rtstruct.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/SC_rgb_dcmtk_ebcys4_dcmd.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/color-px.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/test-SR.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/mlut_18.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/SC_rgb_expb.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/MR_small_jpeg_ls_lossless.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/SC_rgb_16bit.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/liver_expb_1frame.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/693_J2KI.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> copying pydicom/data/test_files/badVR.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files/dicomdirtests
> copying pydicom/data/test_files/dicomdirtests/DICOMDIR-implicit -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files/dicomdirtests
> copying pydicom/data/test_files/dicomdirtests/DICOMDIR-nooffset -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files/dicomdirtests
> copying pydicom/data/test_files/dicomdirtests/DICOMDIR-reordered -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files/dicomdirtests
> copying pydicom/data/test_files/dicomdirtests/DICOMDIR-bigEnd -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files/dicomdirtests
> copying pydicom/data/test_files/dicomdirtests/README.txt -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files/dicomdirtests
> copying pydicom/data/test_files/dicomdirtests/DICOMDIR-empty.dcm -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files/dicomdirtests
> copying pydicom/data/test_files/dicomdirtests/DICOMDIR-nopatient -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files/dicomdirtests
> copying pydicom/data/test_files/dicomdirtests/DICOMDIR -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files/dicomdirtests
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files/dicomdirtests/98892003
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files/dicomdirtests/98892003/MR1
> copying pydicom/data/test_files/dicomdirtests/98892003/MR1/15820 -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files/dicomdirtests/98892003/MR1
> copying pydicom/data/test_files/dicomdirtests/98892003/MR1/5641 -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files/dicomdirtests/98892003/MR1
> copying pydicom/data/test_files/dicomdirtests/98892003/MR1/4919 -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files/dicomdirtests/98892003/MR1
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files/dicomdirtests/98892003/MR2
> copying pydicom/data/test_files/dicomdirtests/98892003/MR2/15970 -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files/dicomdirtests/98892003/MR2
> copying pydicom/data/test_files/dicomdirtests/98892003/MR2/5011 -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files/dicomdirtests/98892003/MR2
> copying pydicom/data/test_files/dicomdirtests/98892003/MR2/6605 -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files/dicomdirtests/98892003/MR2
> copying pydicom/data/test_files/dicomdirtests/98892003/MR2/6273 -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files/dicomdirtests/98892003/MR2
> copying pydicom/data/test_files/dicomdirtests/98892003/MR2/4950 -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files/dicomdirtests/98892003/MR2
> copying pydicom/data/test_files/dicomdirtests/98892003/MR2/4981 -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files/dicomdirtests/98892003/MR2
> copying pydicom/data/test_files/dicomdirtests/98892003/MR2/6935 -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files/dicomdirtests/98892003/MR2
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files/dicomdirtests/98892003/MR700
> copying pydicom/data/test_files/dicomdirtests/98892003/MR700/4678 -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files/dicomdirtests/98892003/MR700
> copying pydicom/data/test_files/dicomdirtests/98892003/MR700/4558 -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files/dicomdirtests/98892003/MR700
> copying pydicom/data/test_files/dicomdirtests/98892003/MR700/4618 -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files/dicomdirtests/98892003/MR700
> copying pydicom/data/test_files/dicomdirtests/98892003/MR700/4467 -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files/dicomdirtests/98892003/MR700
> copying pydicom/data/test_files/dicomdirtests/98892003/MR700/4648 -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files/dicomdirtests/98892003/MR700
> copying pydicom/data/test_files/dicomdirtests/98892003/MR700/4528 -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files/dicomdirtests/98892003/MR700
> copying pydicom/data/test_files/dicomdirtests/98892003/MR700/4588 -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files/dicomdirtests/98892003/MR700
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files/dicomdirtests/77654033
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files/dicomdirtests/77654033/CR1
> copying pydicom/data/test_files/dicomdirtests/77654033/CR1/6154 -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files/dicomdirtests/77654033/CR1
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files/dicomdirtests/77654033/CR2
> copying pydicom/data/test_files/dicomdirtests/77654033/CR2/6247 -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files/dicomdirtests/77654033/CR2
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files/dicomdirtests/77654033/CR3
> copying pydicom/data/test_files/dicomdirtests/77654033/CR3/6278 -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files/dicomdirtests/77654033/CR3
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files/dicomdirtests/77654033/CT2
> copying pydicom/data/test_files/dicomdirtests/77654033/CT2/17166 -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files/dicomdirtests/77654033/CT2
> copying pydicom/data/test_files/dicomdirtests/77654033/CT2/17196 -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files/dicomdirtests/77654033/CT2
> copying pydicom/data/test_files/dicomdirtests/77654033/CT2/17106 -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files/dicomdirtests/77654033/CT2
> copying pydicom/data/test_files/dicomdirtests/77654033/CT2/17136 -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files/dicomdirtests/77654033/CT2
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files/dicomdirtests/98892001
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files/dicomdirtests/98892001/CT5N
> copying pydicom/data/test_files/dicomdirtests/98892001/CT5N/2062 -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files/dicomdirtests/98892001/CT5N
> copying pydicom/data/test_files/dicomdirtests/98892001/CT5N/3353 -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files/dicomdirtests/98892001/CT5N
> copying pydicom/data/test_files/dicomdirtests/98892001/CT5N/2392 -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files/dicomdirtests/98892001/CT5N
> copying pydicom/data/test_files/dicomdirtests/98892001/CT5N/2693 -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files/dicomdirtests/98892001/CT5N
> copying pydicom/data/test_files/dicomdirtests/98892001/CT5N/3023 -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files/dicomdirtests/98892001/CT5N
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files/dicomdirtests/98892001/CT2N
> copying pydicom/data/test_files/dicomdirtests/98892001/CT2N/6924 -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files/dicomdirtests/98892001/CT2N
> copying pydicom/data/test_files/dicomdirtests/98892001/CT2N/6293 -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/data/test_files/dicomdirtests/98892001/CT2N
> cd doc; PYTHONPATH=.. python3 /usr/bin/sphinx-build -N -bhtml . build/html
> Running Sphinx v2.4.3
> Failed to execute git to get revision
> making output directory... done
> loading intersphinx inventory from https://docs.python.org/3/objects.inv...
> loading intersphinx inventory from https://docs.scipy.org/doc/numpy/objects.inv...
> loading intersphinx inventory from https://docs.scipy.org/doc/scipy/reference/objects.inv...
> loading intersphinx inventory from http://matplotlib.org/objects.inv...
> WARNING: failed to reach any of the inventories with the following issues:
> intersphinx inventory 'https://docs.scipy.org/doc/numpy/objects.inv' not fetchable due to <class 'requests.exceptions.ProxyError'>: HTTPSConnectionPool(host='docs.scipy.org', port=443): Max retries exceeded with url: /doc/numpy/objects.inv (Caused by ProxyError('Cannot connect to proxy.', NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7f362de75790>: Failed to establish a new connection: [Errno 111] Connection refused')))
> WARNING: failed to reach any of the inventories with the following issues:
> intersphinx inventory 'https://docs.scipy.org/doc/scipy/reference/objects.inv' not fetchable due to <class 'requests.exceptions.ProxyError'>: HTTPSConnectionPool(host='docs.scipy.org', port=443): Max retries exceeded with url: /doc/scipy/reference/objects.inv (Caused by ProxyError('Cannot connect to proxy.', NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7f362de75b50>: Failed to establish a new connection: [Errno 111] Connection refused')))
> WARNING: failed to reach any of the inventories with the following issues:
> intersphinx inventory 'https://docs.python.org/3/objects.inv' not fetchable due to <class 'requests.exceptions.ProxyError'>: HTTPSConnectionPool(host='docs.python.org', port=443): Max retries exceeded with url: /3/objects.inv (Caused by ProxyError('Cannot connect to proxy.', NewConnectionError('<urllib3.connection.HTTPSConnection object at 0x7f362de75160>: Failed to establish a new connection: [Errno 111] Connection refused')))
> WARNING: failed to reach any of the inventories with the following issues:
> intersphinx inventory 'http://matplotlib.org/objects.inv' not fetchable due to <class 'requests.exceptions.ProxyError'>: HTTPConnectionPool(host='127.0.0.1', port=9): Max retries exceeded with url: http://matplotlib.org/objects.inv (Caused by ProxyError('Cannot connect to proxy.', NewConnectionError('<urllib3.connection.HTTPConnection object at 0x7f362de75eb0>: Failed to establish a new connection: [Errno 111] Connection refused')))
> generating gallery...
> generating gallery for auto_examples... [ 25%] plot_dicom_difference.py
> generating gallery for auto_examples... [ 50%] show_charset_name.py
> generating gallery for auto_examples... [ 75%] memory_dataset.py
> generating gallery for auto_examples... [100%] dicomtree.py
>
> generating gallery for auto_examples/image_processing... [ 50%] plot_downsize_image.py
> generating gallery for auto_examples/image_processing... [100%] reslice.py
>
> generating gallery for auto_examples/input_output... [ 20%] plot_read_rtplan.py
> generating gallery for auto_examples/input_output... [ 40%] plot_read_dicom.py
> generating gallery for auto_examples/input_output... [ 60%] plot_printing_dataset.py
> generating gallery for auto_examples/input_output... [ 80%] plot_write_dicom.py
> generating gallery for auto_examples/input_output... [100%] plot_read_dicom_directory.py
>
> generating gallery for auto_examples/metadata_processing... [ 33%] plot_sequences.py
> generating gallery for auto_examples/metadata_processing... [ 66%] plot_add_dict_entries.py
> generating gallery for auto_examples/metadata_processing... [100%] plot_anonymize.py
>
> computation time summary:
> - ../examples/input_output/plot_read_dicom.py: 0.10 sec 0.0 MB
> - ../examples/plot_dicom_difference.py: 0.09 sec 0.0 MB
> - ../examples/input_output/plot_read_dicom_directory.py: 0.04 sec 0.0 MB
> - ../examples/metadata_processing/plot_anonymize.py: 0.01 sec 0.0 MB
> - ../examples/input_output/plot_printing_dataset.py: 0.00 sec 0.0 MB
> - ../examples/image_processing/plot_downsize_image.py: 0.00 sec 0.0 MB
> - ../examples/input_output/plot_write_dicom.py: 0.00 sec 0.0 MB
> - ../examples/input_output/plot_read_rtplan.py: 0.00 sec 0.0 MB
> - ../examples/metadata_processing/plot_add_dict_entries.py: 0.00 sec 0.0 MB
> - ../examples/metadata_processing/plot_sequences.py: 0.00 sec 0.0 MB
> - ../examples/dicomtree.py: 0.00 sec 0.0 MB
> - ../examples/image_processing/reslice.py: 0.00 sec 0.0 MB
> - ../examples/memory_dataset.py: 0.00 sec 0.0 MB
> - ../examples/show_charset_name.py: 0.00 sec 0.0 MB
> [autosummary] generating autosummary for: faq/index.rst, guides/element_value_types.rst, guides/index.rst, guides/writing_documentation.rst, index.rst, old/base_element.rst, old/getting_started.rst, old/image_data_handlers.rst, old/private_data_elements.rst, old/pydicom_user_guide.rst, ..., release_notes/v1.4.1.rst, tutorials/contributing.rst, tutorials/contributing_code.rst, tutorials/contributing_docs.rst, tutorials/dataset_basics.rst, tutorials/dicom_json.rst, tutorials/index.rst, tutorials/installation.rst, tutorials/sr_basics.rst, tutorials/virtualenvs.rst
> [autosummary] generating autosummary for: /<<PKGBUILDDIR>>/doc/reference/generated/pydicom.charset.convert_encodings.rst, /<<PKGBUILDDIR>>/doc/reference/generated/pydicom.charset.decode.rst, /<<PKGBUILDDIR>>/doc/reference/generated/pydicom.charset.decode_string.rst, /<<PKGBUILDDIR>>/doc/reference/generated/pydicom.charset.encode_string.rst, /<<PKGBUILDDIR>>/doc/reference/generated/pydicom.config.allow_DS_float.rst, /<<PKGBUILDDIR>>/doc/reference/generated/pydicom.config.data_element_callback.rst, /<<PKGBUILDDIR>>/doc/reference/generated/pydicom.config.data_element_callback_kwargs.rst, /<<PKGBUILDDIR>>/doc/reference/generated/pydicom.config.datetime_conversion.rst, /<<PKGBUILDDIR>>/doc/reference/generated/pydicom.config.debug.rst, /<<PKGBUILDDIR>>/doc/reference/generated/pydicom.config.enforce_valid_values.rst, ..., /<<PKGBUILDDIR>>/doc/reference/generated/pydicom.values.convert_TM_string.rst, /<<PKGBUILDDIR>>/doc/reference/generated/pydicom.values.convert_UI.rst, /<<PKGBUILDDIR>>/doc/reference/generated/pydicom.values.convert_UN.rst, /<<PKGBUILDDIR>>/doc/reference/generated/pydicom.values.convert_UR_string.rst, /<<PKGBUILDDIR>>/doc/reference/generated/pydicom.values.convert_numbers.rst, /<<PKGBUILDDIR>>/doc/reference/generated/pydicom.values.convert_single_string.rst, /<<PKGBUILDDIR>>/doc/reference/generated/pydicom.values.convert_string.rst, /<<PKGBUILDDIR>>/doc/reference/generated/pydicom.values.convert_tag.rst, /<<PKGBUILDDIR>>/doc/reference/generated/pydicom.values.convert_text.rst, /<<PKGBUILDDIR>>/doc/reference/generated/pydicom.values.convert_value.rst
> building [mo]: targets for 0 po files that are out of date
> building [html]: targets for 67 source files that are out of date
> updating environment: [new config] 257 added, 0 changed, 0 removed
> reading sources... [ 0%] auto_examples/dicomtree
> reading sources... [ 0%] auto_examples/image_processing/plot_downsize_image
> reading sources... [ 1%] auto_examples/image_processing/reslice
> reading sources... [ 1%] auto_examples/image_processing/sg_execution_times
> reading sources... [ 1%] auto_examples/index
> reading sources... [ 2%] auto_examples/input_output/plot_printing_dataset
> reading sources... [ 2%] auto_examples/input_output/plot_read_dicom
> reading sources... [ 3%] auto_examples/input_output/plot_read_dicom_directory
> reading sources... [ 3%] auto_examples/input_output/plot_read_rtplan
> reading sources... [ 3%] auto_examples/input_output/plot_write_dicom
> reading sources... [ 4%] auto_examples/input_output/sg_execution_times
> reading sources... [ 4%] auto_examples/memory_dataset
> reading sources... [ 5%] auto_examples/metadata_processing/plot_add_dict_entries
> reading sources... [ 5%] auto_examples/metadata_processing/plot_anonymize
> reading sources... [ 5%] auto_examples/metadata_processing/plot_sequences
> reading sources... [ 6%] auto_examples/metadata_processing/sg_execution_times
> reading sources... [ 6%] auto_examples/plot_dicom_difference
> reading sources... [ 7%] auto_examples/sg_execution_times
> reading sources... [ 7%] auto_examples/show_charset_name
> reading sources... [ 7%] faq/index
> reading sources... [ 8%] guides/element_value_types
> reading sources... [ 8%] guides/index
> reading sources... [ 8%] guides/writing_documentation
> reading sources... [ 9%] index
> reading sources... [ 9%] old/base_element
> reading sources... [ 10%] old/getting_started
> reading sources... [ 10%] old/image_data_handlers
> reading sources... [ 10%] old/private_data_elements
> reading sources... [ 11%] old/pydicom_user_guide
> reading sources... [ 11%] old/python2_support
> reading sources... [ 12%] old/ref_guide
> reading sources... [ 12%] old/transition_to_pydicom1
> reading sources... [ 12%] old/viewing_images
> reading sources... [ 13%] old/working_with_overlays
> reading sources... [ 13%] old/working_with_pixel_data
> reading sources... [ 14%] old/writing_files
> reading sources... [ 14%] reference/charset
> reading sources... [ 14%] reference/config
> reading sources... [ 15%] reference/data
> reading sources... [ 15%] reference/datadict
> reading sources... [ 15%] reference/dataset
> reading sources... [ 16%] reference/dicomdir
> reading sources... [ 16%] reference/elem
> reading sources... [ 17%] reference/elem.dataelem
> reading sources... [ 17%] reference/elem.multival
> reading sources... [ 17%] reference/elem.sequence
> reading sources... [ 18%] reference/elem.tag
> reading sources... [ 18%] reference/elem.valuerep
> reading sources... [ 19%] reference/elem.values
> reading sources... [ 19%] reference/encaps
> reading sources... [ 19%] reference/errors
> reading sources... [ 20%] reference/fileio
> reading sources... [ 20%] reference/fileio.base
> reading sources... [ 21%] reference/fileio.read
> reading sources... [ 21%] reference/fileio.util
> reading sources... [ 21%] reference/fileio.write
> reading sources... [ 22%] reference/generated/pydicom.charset.convert_encodings
> reading sources... [ 22%] reference/generated/pydicom.charset.decode
> reading sources... [ 22%] reference/generated/pydicom.charset.decode_string
> reading sources... [ 23%] reference/generated/pydicom.charset.encode_string
> reading sources... [ 23%] reference/generated/pydicom.config.allow_DS_float
> reading sources... [ 24%] reference/generated/pydicom.config.data_element_callback
> reading sources... [ 24%] reference/generated/pydicom.config.data_element_callback_kwargs
> reading sources... [ 24%] reference/generated/pydicom.config.datetime_conversion
> reading sources... [ 25%] reference/generated/pydicom.config.debug
> reading sources... [ 25%] reference/generated/pydicom.config.enforce_valid_values
> reading sources... [ 26%] reference/generated/pydicom.config.overlay_data_handlers
> reading sources... [ 26%] reference/generated/pydicom.config.pixel_data_handlers
> reading sources... [ 26%] reference/generated/pydicom.config.reset_data_element_callback
> reading sources... [ 27%] reference/generated/pydicom.config.use_DS_decimal
> reading sources... [ 27%] reference/generated/pydicom.data.get_charset_files
> reading sources... [ 28%] reference/generated/pydicom.data.get_palette_files
> reading sources... [ 28%] reference/generated/pydicom.data.get_testdata_file
> reading sources... [ 28%] reference/generated/pydicom.data.get_testdata_files
> reading sources... [ 29%] reference/generated/pydicom.datadict.add_dict_entries
> reading sources... [ 29%] reference/generated/pydicom.datadict.add_dict_entry
> reading sources... [ 29%] reference/generated/pydicom.datadict.add_private_dict_entries
> reading sources... [ 30%] reference/generated/pydicom.datadict.add_private_dict_entry
> reading sources... [ 30%] reference/generated/pydicom.datadict.dictionary_VM
> reading sources... [ 31%] reference/generated/pydicom.datadict.dictionary_VR
> reading sources... [ 31%] reference/generated/pydicom.datadict.dictionary_description
> reading sources... [ 31%] reference/generated/pydicom.datadict.dictionary_has_tag
> reading sources... [ 32%] reference/generated/pydicom.datadict.dictionary_is_retired
> reading sources... [ 32%] reference/generated/pydicom.datadict.dictionary_keyword
> reading sources... [ 33%] reference/generated/pydicom.datadict.get_entry
> reading sources... [ 33%] reference/generated/pydicom.datadict.get_private_entry
> reading sources... [ 33%] reference/generated/pydicom.datadict.keyword_for_tag
> reading sources... [ 34%] reference/generated/pydicom.datadict.mask_match
> reading sources... [ 34%] reference/generated/pydicom.datadict.private_dictionary_VM
> reading sources... [ 35%] reference/generated/pydicom.datadict.private_dictionary_VR
> reading sources... [ 35%] reference/generated/pydicom.datadict.private_dictionary_description
> reading sources... [ 35%] reference/generated/pydicom.datadict.repeater_has_keyword
> reading sources... [ 36%] reference/generated/pydicom.datadict.repeater_has_tag
> reading sources... [ 36%] reference/generated/pydicom.datadict.tag_for_keyword
> reading sources... [ 36%] reference/generated/pydicom.dataelem.DataElement
> reading sources... [ 37%] reference/generated/pydicom.dataelem.DataElement_from_raw
> reading sources... [ 37%] reference/generated/pydicom.dataelem.RawDataElement
> reading sources... [ 38%] reference/generated/pydicom.dataelem.isMultiValue
> reading sources... [ 38%] reference/generated/pydicom.dataset.Dataset
> reading sources... [ 38%] reference/generated/pydicom.dataset.FileDataset
> reading sources... [ 39%] reference/generated/pydicom.dataset.PrivateBlock
> reading sources... [ 39%] reference/generated/pydicom.dataset.validate_file_meta
> reading sources... [ 40%] reference/generated/pydicom.dicomdir.DicomDir
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>
> WARNING: LaTeX command 'latex' cannot be run (needed for math display), check the imgmath_latex setting
> generating indices... genindex py-modindexdone
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> build succeeded, 5 warnings.
>
> The HTML pages are in build/html.
>
> Sphinx-gallery successfully executed 10 out of 10 files subselected by:
>
> gallery_conf["filename_pattern"] = '/plot'
> gallery_conf["ignore_pattern"] = '__init__\\.py'
>
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>
> /usr/lib/python3/dist-packages/sphinx_rtd_theme/search.html:21: RemovedInSphinx30Warning: To modify script_files in the theme is deprecated. Please insert a <script> tag directly in your theme instead.
> {% endblock %}
> make[1]: Leaving directory '/<<PKGBUILDDIR>>'
> dh_auto_test -O--buildsystem=pybuild
> pybuild --test --test-pytest -i python{version} -p 3.8
> I: pybuild base:217: cd /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build; python3.8 -m pytest
> ============================= test session starts ==============================
> platform linux -- Python 3.8.4rc1, pytest-4.6.11, py-1.8.1, pluggy-0.13.0
> rootdir: /<<PKGBUILDDIR>>
> collected 1742 items
>
> pydicom/tests/test_JPEG_LS_transfer_syntax.py ....ssss.. [ 0%]
> pydicom/tests/test_charset.py .......................................... [ 2%]
> ............ [ 3%]
> pydicom/tests/test_codedict.py .......................... [ 5%]
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> pydicom/tests/test_config.py ..... [ 6%]
> pydicom/tests/test_data_manager.py .... [ 6%]
> pydicom/tests/test_dataelem.py ......................s.................. [ 8%]
> [ 8%]
> pydicom/tests/test_dataset.py .......................................... [ 11%]
> ..................s................................................ [ 14%]
> pydicom/tests/test_dicomdir.py ........... [ 15%]
> pydicom/tests/test_dictionary.py ................. [ 16%]
> pydicom/tests/test_encaps.py ........................................... [ 18%]
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> pydicom/tests/test_numpy_pixel_data.py .ssssssssssssssssssssss.......... [ 62%]
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> .... [ 71%]
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> sssssssssssssssssssssssss.............................X.X........... [ 80%]
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> [ 93%]
> pydicom/tests/test_uid.py ........................................ [ 95%]
> pydicom/tests/test_unicode.py . [ 95%]
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> pydicom/tests/test_valuerep.py ..................................... [ 98%]
> pydicom/tests/test_values.py ...ss.........s.... [100%]
>
> =================================== FAILURES ===================================
> _____________ TestNumpy_PaletteColor.test_invalid_bit_depth_raises _____________
>
> self = <pydicom.tests.test_handler_util.TestNumpy_PaletteColor object at 0x7f7da6ceef70>
>
> def test_invalid_bit_depth_raises(self):
> """Test that an invalid bit depth raises an exception."""
> ds = dcmread(PAL_08_256_0_16_1F)
> ds.RedPaletteColorLookupTableDescriptor[2] = 15
> msg = (
> r'data type "uint15" not understood'
> )
> with pytest.raises(TypeError, match=msg):
> > apply_color_lut(ds.pixel_array, ds)
>
> pydicom/tests/test_handler_util.py:921:
> _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
>
> arr = array([[244, 244, 244, ..., 244, 244, 244],
> [244, 244, 244, ..., 244, 244, 244],
> [244, 244, 244, ..., 24..., 0, 0, 0],
> [ 0, 0, 0, ..., 0, 0, 0],
> [ 0, 0, 0, ..., 0, 0, 0]], dtype=uint8)
> ds = (0008, 0005) Specific Character Set CS: 'ISO_IR 100'
> (0008, 0008) Image Type CS:...ion LUT Shape CS: 'IDENTITY'
> (7fe0, 0010) Pixel Data OW: Array of 480000 elements
> palette = None
>
> def apply_color_lut(arr, ds=None, palette=None):
> """Apply a color palette lookup table to `arr`.
>
> .. versionadded:: 1.4
>
> If (0028,1201-1203) *Palette Color Lookup Table Data* are missing
> then (0028,1221-1223) *Segmented Palette Color Lookup Table Data* must be
> present and vice versa. The presence of (0028,1204) *Alpha Palette Color
> Lookup Table Data* or (0028,1224) *Alpha Segmented Palette Color Lookup
> Table Data* is optional.
>
> Use of this function with the :dcm:`Enhanced Palette Color Lookup Table
> Module<part03/sect_C.7.6.23.html>` or :dcm:`Supplemental Palette Color LUT
> Module<part03/sect_C.7.6.19.html>` is not currently supported.
>
> Parameters
> ----------
> arr : numpy.ndarray
> The pixel data to apply the color palette to.
> ds : dataset.Dataset, optional
> Required if `palette` is not supplied. A
> :class:`~pydicom.dataset.Dataset` containing a suitable
> :dcm:`Image Pixel<part03/sect_C.7.6.3.html>` or
> :dcm:`Palette Color Lookup Table<part03/sect_C.7.9.html>` Module.
> palette : str or uid.UID, optional
> Required if `ds` is not supplied. The name of one of the
> :dcm:`well-known<part06/chapter_B.html>` color palettes defined by the
> DICOM Standard. One of: ``'HOT_IRON'``, ``'PET'``,
> ``'HOT_METAL_BLUE'``, ``'PET_20_STEP'``, ``'SPRING'``, ``'SUMMER'``,
> ``'FALL'``, ``'WINTER'`` or the corresponding well-known (0008,0018)
> *SOP Instance UID*.
>
> Returns
> -------
> numpy.ndarray
> The RGB or RGBA pixel data as an array of ``np.uint8`` or ``np.uint16``
> values, depending on the 3rd value of (0028,1201) *Red Palette Color
> Lookup Table Descriptor*.
>
> References
> ----------
>
> * :dcm:`Image Pixel Module<part03/sect_C.7.6.3.html>`
> * :dcm:`Supplemental Palette Color LUT Module<part03/sect_C.7.6.19.html>`
> * :dcm:`Enhanced Palette Color LUT Module<part03/sect_C.7.6.23.html>`
> * :dcm:`Palette Colour LUT Module<part03/sect_C.7.9.html>`
> * :dcm:`Supplemental Palette Color LUTs
> <part03/sect_C.8.16.2.html#sect_C.8.16.2.1.1.1>`
> """
> # Note: input value (IV) is the stored pixel value in `arr`
> # LUTs[IV] -> [R, G, B] values at the IV pixel location in `arr`
> if not ds and not palette:
> raise ValueError("Either 'ds' or 'palette' is required")
>
> if palette:
> # Well-known palettes are all 8-bits per entry
> datasets = {
> '1.2.840.10008.1.5.1': 'hotiron.dcm',
> '1.2.840.10008.1.5.2': 'pet.dcm',
> '1.2.840.10008.1.5.3': 'hotmetalblue.dcm',
> '1.2.840.10008.1.5.4': 'pet20step.dcm',
> '1.2.840.10008.1.5.5': 'spring.dcm',
> '1.2.840.10008.1.5.6': 'summer.dcm',
> '1.2.840.10008.1.5.7': 'fall.dcm',
> '1.2.840.10008.1.5.8': 'winter.dcm',
> }
> if not UID(palette).is_valid:
> try:
> uids = {
> 'HOT_IRON': '1.2.840.10008.1.5.1',
> 'PET': '1.2.840.10008.1.5.2',
> 'HOT_METAL_BLUE': '1.2.840.10008.1.5.3',
> 'PET_20_STEP': '1.2.840.10008.1.5.4',
> 'SPRING': '1.2.840.10008.1.5.5',
> 'SUMMER': '1.2.840.10008.1.5.6',
> 'FALL': '1.2.840.10008.1.5.8',
> 'WINTER': '1.2.840.10008.1.5.7',
> }
> palette = uids[palette]
> except KeyError:
> raise ValueError("Unknown palette '{}'".format(palette))
>
> try:
> from pydicom import dcmread
> fname = datasets[palette]
> ds = dcmread(get_palette_files(fname)[0])
> except KeyError:
> raise ValueError("Unknown palette '{}'".format(palette))
>
> # C.8.16.2.1.1.1: Supplemental Palette Color LUT
> # TODO: Requires greyscale visualisation pipeline
> if getattr(ds, 'PixelPresentation', None) in ['MIXED', 'COLOR']:
> raise ValueError(
> "Use of this function with the Supplemental Palette Color Lookup "
> "Table Module is not currently supported"
> )
>
> # All channels are supposed to be identical
> lut_desc = ds.RedPaletteColorLookupTableDescriptor
> # A value of 0 = 2^16 entries
> nr_entries = lut_desc[0] or 2**16
>
> # May be negative if Pixel Representation is 1
> first_map = lut_desc[1]
> # Actual bit depth may be larger (8 bit entries in 16 bits allocated)
> nominal_depth = lut_desc[2]
> > dtype = np.dtype('uint{:.0f}'.format(nominal_depth))
> E TypeError: data type 'uint15' not understood
>
> pydicom/pixel_data_handlers/util.py:125: TypeError
>
> During handling of the above exception, another exception occurred:
>
> self = <pydicom.tests.test_handler_util.TestNumpy_PaletteColor object at 0x7f7da6ceef70>
>
> def test_invalid_bit_depth_raises(self):
> """Test that an invalid bit depth raises an exception."""
> ds = dcmread(PAL_08_256_0_16_1F)
> ds.RedPaletteColorLookupTableDescriptor[2] = 15
> msg = (
> r'data type "uint15" not understood'
> )
> with pytest.raises(TypeError, match=msg):
> > apply_color_lut(ds.pixel_array, ds)
> E AssertionError: Pattern 'data type "uint15" not understood' not found in "data type 'uint15' not understood"
>
> pydicom/tests/test_handler_util.py:921: AssertionError
> =============================== warnings summary ===============================
> pydicom/tests/test_dataset.py:1393
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build/pydicom/tests/test_dataset.py:1393: SyntaxWarning: "is" with a literal. Did you mean "=="?
> if elem.keyword is 'PatientID':
>
> -- Docs: https://docs.pytest.org/en/latest/warnings.html
> == 1 failed, 1534 passed, 205 skipped, 2 xpassed, 1 warnings in 11.59 seconds ==
> E: pybuild pybuild:352: test: plugin distutils failed with: exit code=1: cd /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_pydicom/build; python3.8 -m pytest
> dh_auto_test: error: pybuild --test --test-pytest -i python{version} -p 3.8 returned exit code 13
The full build log is available from:
http://qa-logs.debian.net/2020/07/09/pydicom_1.4.1-1_unstable.log
A list of current common problems and possible solutions is available at
http://wiki.debian.org/qa.debian.org/FTBFS . You're welcome to contribute!
About the archive rebuild: The rebuild was done on EC2 VM instances from
Amazon Web Services, using a clean, minimal and up-to-date chroot. Every
failed build was retried once to eliminate random failures.
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