[Debian-med-packaging] Bug#965079: ITP: graphbin -- refined binning of metagenomic contigs using assembly graphs
Shayan Doust
hello at shayandoust.me
Wed Jul 15 19:51:53 BST 2020
Package: wnpp
Severity: wishlist
Subject: ITP: graphbin -- refined binning of metagenomic contigs using assembly graphs
Package: wnpp
Owner: Shayan Doust <hello at shayandoust.me>
Severity: wishlist
* Package name : graphbin
Version : 1.1
Upstream Author : Graphbin Project
* URL : https://github.com/Vini2/GraphBin
* License : GPL-2.0+
Programming Lang: Python
Description : refined binning of metagenomic contigs using assembly graphs
GraphBin is a NGS data-based metagenomic contig bin refinment tool that
makes use of the contig connectivity information from the assembly graph
to bin contigs. It utilizes the binning result of an existing binning
tool and a label propagation algorithm to correct mis-binned contigs and
predict the labels of contigs which are discarded due to short length.
Remark: This package is maintained by Debian Med Packaging Team at
https://salsa.debian.org/med-team/graphbin
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