[Debian-med-packaging] Bug#965079: ITP: graphbin -- refined binning of metagenomic contigs using assembly graphs

Shayan Doust hello at shayandoust.me
Wed Jul 15 19:51:53 BST 2020


Package: wnpp
Severity: wishlist

Subject: ITP: graphbin -- refined binning of metagenomic contigs using assembly graphs
Package: wnpp
Owner: Shayan Doust <hello at shayandoust.me>
Severity: wishlist

* Package name    : graphbin
  Version         : 1.1
  Upstream Author : Graphbin Project 
* URL             : https://github.com/Vini2/GraphBin
* License         : GPL-2.0+
  Programming Lang: Python
  Description     : refined binning of metagenomic contigs using assembly graphs
 GraphBin is a NGS data-based metagenomic contig bin refinment tool that
 makes use of the contig connectivity information from the assembly graph
 to bin contigs. It utilizes the binning result of an existing binning
 tool and a label propagation algorithm to correct mis-binned contigs and
 predict the labels of contigs which are discarded due to short length.

Remark: This package is maintained by Debian Med Packaging Team at
   https://salsa.debian.org/med-team/graphbin



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