[Debian-med-packaging] Bug#962057: ITP: covtobed -- convert the coverage track from a BAM file into a BED file
Shayan Doust
hello at shayandoust.me
Tue Jun 2 19:09:06 BST 2020
Package: wnpp
Severity: wishlist
Subject: ITP: covtobed -- convert the coverage track from a BAM file into a BED file
Package: wnpp
Owner: Shayan Doust <hello at shayandoust.me>
Severity: wishlist
* Package name : covtobed
Version : 1.1.2
Upstream Author : Giovanni Birolo and Andrea Telatin
* URL : https://github.com/telatin/covtobed
* License : Expat
Programming Lang: C
Description : convert the coverage track from a BAM file into a BED file
Reads one (or more) alignment files (sorted BAM) and prints a BED with
the coverage. It will join consecutive bases with the same coverage, and
can be used to only print a BED file with the regions having a specific
coverage range.
Remark: This package is maintained by Debian Med Packaging Team at
https://salsa.debian.org/med-team/covtobed
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