[Debian-med-packaging] Bug#962190: primer3: please disable Big Endian tests on autopkgtests too

[Gianfranco Costamagna]

control: tags -1 patch

This might work better:

--- primer3-2.4.0/debian/tests/run-unit-test	2018-05-28 15:44:30.000000000 +0200
+++ primer3-2.4.0/debian/tests/run-unit-test	2020-06-04 11:47:04.000000000 +0200
@@ -8,6 +8,12 @@
   AUTOPKGTEST_TMP=`mktemp -d /tmp/${pkg}-test.XXXXXX`
 fi
 
+BUILDARCH=$(dpkg-architecture -q DEB_BUILD_ARCH_ENDIAN)
+
+P3CORE_FAILED_TESTS="primer_masker primer_masker_formatted"
+
+FAILED_TESTS="testmasker"
+
 cp -a /usr/share/doc/${pkg}/examples/* $AUTOPKGTEST_TMP
 
 cd $AUTOPKGTEST_TMP
@@ -19,6 +25,16 @@
 ln -s /usr/bin/ntthal ./src/ntthal
 ln -s /usr/bin/oligotm ./src/oligotm
 
+if [ $BUILDARCH = big ]; then
+  cp -a test/p3test.pl test/p3test.pl~
+  cp -a test/Makefile test/Makefile~
+  # exclude tests known to fail on big endian
+  # See README.source for further explanation.
+  for tst in $P3CORE_FAILED_TESTS ; do sed -i "/$tst/d" test/p3test.pl ; done
+  sed -i "0,/$FAILED_TESTS/s///" test/Makefile
+  sed -i "/$FAILED_TESTS/,/endif/d" test/Makefile
+fi
+
 cd test/;
 
 echo "testcmdline:"
@@ -36,4 +52,12 @@
 echo "testtm:"
 perl oligotm_test.pl ${TESTOPTS}
 
+cd ..
+
+if [ $BUILDARCH = big ]; then
+  # restore original test file
+  mv test/p3test.pl~ test/p3test.pl
+  mv test/Makefile~ test/Makefile
+fi
+
 echo "PASS"