[Debian-med-packaging] Bug#962292: ITP: flye -- de novo assembler for single molecule sequencing reads using repeat graphs
Andreas Tille
tille at debian.org
Fri Jun 5 18:39:20 BST 2020
Package: wnpp
Severity: wishlist
Subject: ITP: flye -- de novo assembler for single molecule sequencing reads using repeat graphs
Package: wnpp
Owner: Andreas Tille <tille at debian.org>
Severity: wishlist
* Package name : flye
Version : 2.7.1
Upstream Author : , The Regents of the University of California
* URL : https://github.com/fenderglass/Flye
* License : BSD-3-Clause
Programming Lang: C
Description : de novo assembler for single molecule sequencing reads using repeat graphs
Flye is a de novo assembler for single molecule sequencing reads, such
as those produced by PacBio and Oxford Nanopore Technologies. It is
designed for a wide range of datasets, from small bacterial projects to
large mammalian-scale assemblies. The package represents a complete
pipeline: it takes raw PacBio / ONT reads as input and outputs polished
contigs. Flye also has a special mode for metagenome assembly.
Remark: This package is maintained by Debian Med Packaging Team at
https://salsa.debian.org/med-team/flye
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