[Debian-med-packaging] Bug#962292: ITP: flye -- de novo assembler for single molecule sequencing reads using repeat graphs

Andreas Tille tille at debian.org
Fri Jun 5 18:39:20 BST 2020


Package: wnpp
Severity: wishlist

Subject: ITP: flye -- de novo assembler for single molecule sequencing reads using repeat graphs
Package: wnpp
Owner: Andreas Tille <tille at debian.org>
Severity: wishlist

* Package name    : flye
  Version         : 2.7.1
  Upstream Author : , The Regents of the University of California
* URL             : https://github.com/fenderglass/Flye
* License         : BSD-3-Clause
  Programming Lang: C
  Description     : de novo assembler for single molecule sequencing reads using repeat graphs
 Flye is a de novo assembler for single molecule sequencing reads, such
 as those produced by PacBio and Oxford Nanopore Technologies. It is
 designed for a wide range of datasets, from small bacterial projects to
 large mammalian-scale assemblies. The package represents a complete
 pipeline: it takes raw PacBio / ONT reads as input and outputs polished
 contigs. Flye also has a special mode for metagenome assembly.

Remark: This package is maintained by Debian Med Packaging Team at
   https://salsa.debian.org/med-team/flye



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