[Debian-med-packaging] Bug#960756: python-biopython FTBFS on 32bit: test_NCBI_BLAST_tools.BlastDB failures

[Andreas Tille]

Hi,

any voluntee to follow this hint of upstream?

> Perhaps makeblastdb itself failed (and our wrapper didn't notice)? Those
> are the first files looked for after calling makeblastdb, to see if it
> could make a BLAST database.  Are there any GenBank/NC_005816.fna.n* or
> GenBank/NC_005816.faa.p* files present?
> 
> If it helps, the commands our script was trying to run were:
> 
> $ makeblastdb -dbtype nucl -in GenBank/NC_005816.fna \
> -parse_seqids -hash_index -max_file_sz 20MB  -taxid 10
> 
> and:
> 
> $ makeblastdb -dbtype prot -in GenBank/NC_005816.faa \
> -parse_seqids -hash_index -max_file_sz 20MB -taxid 10
> 
> I'm not sure I have remote access to any 32bit machines right now...

Kind regards

       Andreas.

-- 
http://fam-tille.de