[Debian-med-packaging] Bug#963015: ITP: pyranges -- 2D representation of genomic intervals and their annotations
Steffen Moeller
moeller at debian.org
Wed Jun 17 19:20:50 BST 2020
Package: wnpp
Severity: wishlist
Subject: ITP: pyranges -- 2D representation of genomic intervals and their annotations
Package: wnpp
Owner: Steffen Moeller <moeller at debian.org>
Severity: wishlist
* Package name : pyranges
Version : 0.0.58
Upstream Author : Endre Bakken Stovner
* URL : https://github.com/biocore-ntnu/pyranges
* License : MIT
Programming Lang: Python
Description : 2D representation of genomic intervals and their annotations
A PyRanges object must have the columns Chromosome, Start and
End. These describe the genomic position and function as implicit row
labels. A Strand column is optional and adds strand information to the
intervals. Any other columns are allowed and are considered metadata.
.
The structure can be filled from .bed, .bam or .gff files, also from
tabular or textual representations.
Remark: This package is maintained by Debian Med Packaging Team at
https://salsa.debian.org/med-team/pyranges
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