[Debian-med-packaging] Bug#963051: ITP: vt -- toolset for short variant discovery in genetic sequence data
Antoni Villalonga
antoni at friki.cat
Thu Jun 18 12:17:28 BST 2020
Package: wnpp
Severity: wishlist
Subject: ITP: vt -- toolset for short variant discovery in genetic sequence data
Package: wnpp
Owner: Antoni Villalonga <antoni at friki.cat>
Severity: wishlist
* Package name : vt
Version : 0.57721+ds
Upstream Author : Adrian Tan <atks at umich.edu>
* URL : https://genome.sph.umich.edu/wiki/Vt
* License : MIT
Programming Lang: C
Description : toolset for short variant discovery in genetic sequence data
vt is a variant tool set that discovers short variants from Next Generation
Sequencing data.
.
Vt-normalize is a tool to normalize representation of genetic variants in
the VCF. Variant normalization is formally defined as the consistent
representation of genetic variants in an unambiguous and concise way. In
vt a simple general algorithm to enforce this is implemented.
Remark: This package is maintained by Debian Med Packaging Team at
https://salsa.debian.org/med-team/vt
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