[Debian-med-packaging] Bug#963051: ITP: vt -- toolset for short variant discovery in genetic sequence data

Antoni Villalonga antoni at friki.cat
Thu Jun 18 12:17:28 BST 2020


Package: wnpp
Severity: wishlist

Subject: ITP: vt -- toolset for short variant discovery in genetic sequence data
Package: wnpp
Owner: Antoni Villalonga <antoni at friki.cat>
Severity: wishlist

* Package name    : vt
  Version         : 0.57721+ds
  Upstream Author : Adrian Tan <atks at umich.edu>
* URL             : https://genome.sph.umich.edu/wiki/Vt
* License         : MIT
  Programming Lang: C
  Description     : toolset for short variant discovery in genetic sequence data
 vt is a variant tool set that discovers short variants from Next Generation
 Sequencing data.
 .
 Vt-normalize is a tool to normalize representation of genetic variants in
 the VCF.  Variant normalization is formally defined as the consistent
 representation of genetic variants in an unambiguous and concise way.  In
 vt a simple general algorithm to enforce this is implemented.

Remark: This package is maintained by Debian Med Packaging Team at
   https://salsa.debian.org/med-team/vt



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