[Debian-med-packaging] Bug#963088: bppsuite: autopkgtest failure on arm64: precision issue in reference data

[Paul Gevers]

Source: bppsuite
Version: 2.4.1-2
X-Debbugs-CC: debian-ci at lists.debian.org
Severity: serious
User: debian-ci at lists.debian.org
Usertags: fails-always

Dear maintainer(s),

You recently added an autopkgtest to your package bppsuite, great.
However, it fails on arm64. Currently this failure is blocking the
migration to testing [1]. Can you please investigate the situation and
fix it?

I copied some of the output at the bottom of this report. It seems to
show a calculation precision issue in your reference data, but maybe the
answer is really good and it's showing an issue with your package on
arm64. (0.00762627 vs 0.00762628)

More information about this bug and the reason for filing it can be found on
https://wiki.debian.org/ContinuousIntegration/RegressionEmailInformation

Paul

[1] https://qa.debian.org/excuses.php?package=bppsuite

https://ci.debian.net/data/autopkgtest/testing/amd64/b/bppsuite/5887912/log.gz

<
(((((6.langur_Sen&Sve:0.00790177,7.langur_Tob&Tfr:1e-06,8.Douc_langur_Pne:0.0233448):0.00758139,9.probiscis_Nla:0.00784523):0.0258479,5.colobus_Cgu&Can:0.036229):0.077728,(((10.baboon_Pcy:0.0080218,11.mangabey_Cat:1e-06):1e-06,12.rhesus_Mmu:0.00761117):1e-06,13.Allen_Ani:0.015264,(14.talapoin_Mta:0.0156828,(15.patas_Epa:0.0160261,16.vervet_Cae:0.00794742):0.00762627):0.0076675):0.0173244):0.0393703,(((1.human:0.0161234,2.chimp_bonobo_gorilla:1e-06):0.00762358,3.orangutan_Ppy:1e-06):0.00723969,4.gibbon_Ggo:0.0319335):0.070116,(17.squirrel_m:0.0258088,(18.tamarin_Soe:0.0317538,19.Marmoset_Cja:0.0413489):1e-06):0.123173);
---
>
(((((6.langur_Sen&Sve:0.00790177,7.langur_Tob&Tfr:1e-06,8.Douc_langur_Pne:0.0233448):0.00758139,9.probiscis_Nla:0.00784523):0.0258479,5.colobus_Cgu&Can:0.036229):0.077728,(((10.baboon_Pcy:0.0080218,11.mangabey_Cat:1e-06):1e-06,12.rhesus_Mmu:0.00761117):1e-06,13.Allen_Ani:0.015264,(14.talapoin_Mta:0.0156828,(15.patas_Epa:0.0160261,16.vervet_Cae:0.00794742):0.00762628):0.0076675):0.0173244):0.0393703,(((1.human:0.0161234,2.chimp_bonobo_gorilla:1e-06):0.00762358,3.orangutan_Ppy:1e-06):0.00723969,4.gibbon_Ggo:0.0319335):0.070116,(17.squirrel_m:0.0258088,(18.tamarin_Soe:0.0317538,19.Marmoset_Cja:0.0413489):1e-06):0.123173);


-------------- next part --------------
A non-text attachment was scrubbed...
Name: signature.asc
Type: application/pgp-signature
Size: 488 bytes
Desc: OpenPGP digital signature
URL: <http://alioth-lists.debian.net/pipermail/debian-med-packaging/attachments/20200618/3122f57d/attachment.sig>