[Debian-med-packaging] Bug#963476: ITP: pplacer -- phylogenetic placement and downstream analysis
Andreas Tille
tille at debian.org
Mon Jun 22 07:57:42 BST 2020
Package: wnpp
Severity: wishlist
Subject: ITP: pplacer -- phylogenetic placement and downstream analysis
Package: wnpp
Owner: Andreas Tille <tille at debian.org>
Severity: wishlist
* Package name : pplacer
Version : 1.1~alpha19
Upstream Author : Matsen, F.A. and Kodner, R.B. and Armbrust, E.
* URL : https://github.com/matsen/pplacer
* License : GPL-3
Programming Lang: C
Description : phylogenetic placement and downstream analysis
Pplacer places reads on a phylogenetic tree. guppy (Grand Unified
Phylogenetic Placement Yanalyzer) yanalyzes them. rppr is a helpful tool
for working with reference packages.
.
Pplacer places query sequences on a fixed reference phylogenetic tree to
maximize phylogenetic likelihood or posterior probability according to a
reference alignment. Pplacer is designed to be fast, to give useful
information about uncertainty, and to offer advanced visualization and
downstream analysis.
Remark: This package is maintained by Debian Med Packaging Team at
https://salsa.debian.org/med-team/pplacer
More information about the Debian-med-packaging
mailing list