[Debian-med-packaging] Bug#963476: ITP: pplacer -- phylogenetic placement and downstream analysis

Andreas Tille tille at debian.org
Mon Jun 22 07:57:42 BST 2020


Package: wnpp
Severity: wishlist

Subject: ITP: pplacer -- phylogenetic placement and downstream analysis
Package: wnpp
Owner: Andreas Tille <tille at debian.org>
Severity: wishlist

* Package name    : pplacer
  Version         : 1.1~alpha19
  Upstream Author : Matsen, F.A. and Kodner, R.B. and Armbrust, E.
* URL             : https://github.com/matsen/pplacer
* License         : GPL-3
  Programming Lang: C
  Description     : phylogenetic placement and downstream analysis
 Pplacer places reads on a phylogenetic tree. guppy (Grand Unified
 Phylogenetic Placement Yanalyzer) yanalyzes them. rppr is a helpful tool
 for working with reference packages.
 .
 Pplacer places query sequences on a fixed reference phylogenetic tree to
 maximize phylogenetic likelihood or posterior probability according to a
 reference alignment. Pplacer is designed to be fast, to give useful
 information about uncertainty, and to offer advanced visualization and
 downstream analysis.

Remark: This package is maintained by Debian Med Packaging Team at
   https://salsa.debian.org/med-team/pplacer



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