[Debian-med-packaging] Bug#953117: infernal: please make the build reproducible

[Chris Lamb]

Source: infernal
Version: 1.1.3-4
Severity: wishlist
Tags: patch
User: reproducible-builds at lists.alioth.debian.org
Usertags: timestamps
X-Debbugs-Cc: reproducible-bugs at lists.alioth.debian.org

Hi,

Whilst working on the Reproducible Builds effort [0] we noticed that
infernal could not be built reproducibly:

│ │ │ ├── ./usr/share/doc/infernal/examples/testsuite/i49.tbl
│ │ │ │ @@ -5,10 +5,10 @@
│ │ │ │  #
│ │ │ │  # Program:         cmsearch
│ │ │ │  # Version:         1.1.3 (Nov 2019)
│ │ │ │  # Pipeline mode:   SEARCH
│ │ │ │  # Query file:      ./../testsuite/bug-i49.cm
│ │ │ │  # Target file:     ./../testsuite/bug-i49.fa
│ │ │ │  # Option settings: ../src/cmsearch --tblout i49.tbl --toponly --cpu 0 ./../testsuite/bug-i49.cm ./../testsuite/bug-i49.fa 
│ │ │ │ -# Current dir:     /build/1st/infernal-1.1.3/testsuite
│ │ │ │ -# Date:            Sun Mar  1 19:36:34 2020
│ │ │ │ +# Current dir:     /build/2/infernal-1.1.3/2nd/testsuite
│ │ │ │ +# Date:            Mon Apr  5 04:14:10 2021
│ │ │ │  # [ok]

Patch attached that excludes this nondetermistic file from the binary
package.

 [0] https://reproducible-builds.org/


Regards,

-- 
      ,''`.
     : :'  :     Chris Lamb
     `. `'`      lamby at debian.org / chris-lamb.co.uk
       `-
-------------- next part --------------
An embedded and charset-unspecified text was scrubbed...
Name: infernal.diff.txt
URL: <http://alioth-lists.debian.net/pipermail/debian-med-packaging/attachments/20200304/734a393d/attachment.txt>