[Debian-med-packaging] Bug#954777: ITP: augur -- pipeline components for real-time virus analysis

Andreas Tille tille at debian.org
Mon Mar 23 11:16:05 GMT 2020


Package: wnpp
Severity: wishlist

Subject: ITP: augur -- pipeline components for real-time virus analysis
Package: wnpp
Owner: Andreas Tille <tille at debian.org>
Severity: wishlist

* Package name    : augur
  Version         : 6.4.2
  Upstream Author : Trevor Bedford and Richard Neher
* URL             : https://github.com/nextstrain/augur
* License         : AGPL-3+
  Programming Lang: Python
  Description     : pipeline components for real-time virus analysis
 The nextstrain project is an attempt to make flexible informatic
 pipelines and visualization tools to track ongoing pathogen evolution as
 sequence data emerges. The nextstrain project derives from nextflu,
 which was specific to influenza evolution.
 .
 nextstrain is comprised of three components:
 .
   * fauna: database and IO scripts for sequence and serological data
   * augur: informatic pipelines to conduct inferences from raw data
   * auspice: web app to visualize resulting inferences

Remark: This package is maintained by Debian Med Packaging Team at
   https://salsa.debian.org/med-team/augur



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