[Debian-med-packaging] Bug#951222: scikit-learn breaks python-skbio autopkgtest: skbio.stats.distance._permdisp.permdisp

[Andreas Tille]

On Tue, Mar 31, 2020 at 11:47:40AM +0200, Christian Kastner wrote:
> I've been working on fixing the open issues of src:scikit-learn, and
> looked into this bug.
> 
> This is odd. When executing the failing test code manually, the output
> is just as expected (p = 0.35). The output is also just as expected when
> the test suite is run at build time [1], as all tests pass.
> 
> It's only when autopkgtest invokes the tests that this test fails.
> 
> At build time, tests are simply run (by pybuild) with,
>      python3.x -m pytest
> whereas the autopkgtest calls
>      python3 -m skbio.test
> so I assume it has something to do with the latter.
> 
> I did not investigate this further, I just reported this back upstream
> to the referenced GitHub issue.
> 
> [1]
> https://buildd.debian.org/status/fetch.php?pkg=python-skbio&arch=amd64&ver=0.5.5-7&stamp=1582910349&raw=0

Thanks a lot for checking

      Andreas.

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