[Debian-med-packaging] Bug#960345: ITP: allelecount -- NGS copy number algorithms

Andreas Tille tille at debian.org
Mon May 11 22:16:46 BST 2020


Package: wnpp
Severity: wishlist

Subject: ITP: allelecount -- NGS copy number algorithms
Package: wnpp
Owner: Andreas Tille <tille at debian.org>
Severity: wishlist

* Package name    : allelecount
  Version         : 4.1.0
  Upstream Author : Genome Research Ltd
* URL             : https://github.com/cancerit/alleleCount
* License         : AGPL-3
  Programming Lang: C
  Description     : NGS copy number algorithms
 Support code for NGS copy number algorithms. Takes a file of locations
 and a [cr|b]am file and generates a count of coverage of each allele
 [ACGT] at that location (given any filter settings).
 .
 The alleleCount package primarily exists to prevent code duplication
 between some other projects, specifically AscatNGS and Battenberg.

Remark: This package is maintained by Debian Med Packaging Team at
   https://salsa.debian.org/med-team/allelecount



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