[Debian-med-packaging] Bug#960345: ITP: allelecount -- NGS copy number algorithms
Andreas Tille
tille at debian.org
Mon May 11 22:16:46 BST 2020
Package: wnpp
Severity: wishlist
Subject: ITP: allelecount -- NGS copy number algorithms
Package: wnpp
Owner: Andreas Tille <tille at debian.org>
Severity: wishlist
* Package name : allelecount
Version : 4.1.0
Upstream Author : Genome Research Ltd
* URL : https://github.com/cancerit/alleleCount
* License : AGPL-3
Programming Lang: C
Description : NGS copy number algorithms
Support code for NGS copy number algorithms. Takes a file of locations
and a [cr|b]am file and generates a count of coverage of each allele
[ACGT] at that location (given any filter settings).
.
The alleleCount package primarily exists to prevent code duplication
between some other projects, specifically AscatNGS and Battenberg.
Remark: This package is maintained by Debian Med Packaging Team at
https://salsa.debian.org/med-team/allelecount
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