[Debian-med-packaging] Bug#975920: ITP: pangolin -- Phylogenetic Assignment of Named Global Outbreak LINeages

[Andreas Tille]

Package: wnpp
Severity: wishlist

Subject: ITP: pangolin -- Phylogenetic Assignment of Named Global Outbreak LINeages
Package: wnpp
Owner: Andreas Tille <tille at debian.org>
Severity: wishlist

* Package name    : pangolin
  Version         : 2.0.8
  Upstream Author : Áine O'Toole, JT McCrone, Emily Scher
* URL             : https://github.com/cov-lineages/pangolin
* License         : GPL-3+
  Programming Lang: Python
  Description     : Phylogenetic Assignment of Named Global Outbreak LINeages
 Pangolin runs a multinomial logistic regression model trained against
 lineage assignments based on GISAID data.
 .
 Legacy pangolin runs using a guide tree and alignment hosted at
 cov-lineages/lineages. Some of this data is sourced from GISAID, but
 anonymised and encrypted to fit with guidelines. Appropriate permissions
 have been given and acknowledgements for the teams that have worked to
 provide the original SARS-CoV-2 genome sequences to GISAID are also
 hosted here.

Remark: This package is maintained by Debian Med Packaging Team at
   https://salsa.debian.org/med-team/pangolin