[Debian-med-packaging] ncbi-entrez-direct_14.0.20201009+dfsg-1_source.changes ACCEPTED into unstable

[Debian FTP Masters]

Accepted:

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Format: 1.8
Date: Mon, 12 Oct 2020 15:14:47 -0400
Source: ncbi-entrez-direct
Architecture: source
Version: 14.0.20201009+dfsg-1
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
Changed-By: Aaron M. Ucko <ucko at debian.org>
Changes:
 ncbi-entrez-direct (14.0.20201009+dfsg-1) unstable; urgency=medium
 .
   * New upstream release.
   * debian/copyright:
     - Add myself (at NCBI) as an upstream author.
     - Also exclude CA.pm and cacert.pm.
   * debian/efetch:
     - Belatedly resync %ncbi_supported with current usage
       (missed -style, -revcomp, -chr_stop, -raw, and -json).
     - Additionally recognize -input and -forward, as supported by the new
       shell implementation.
   * debian/{efetch,einfo}: Substitute e*.ncbi for edirect -*, now that the
     NCBI implementations won't necessarily boil down to edirect one-liners.
   * debian/install: Install ecommon.sh to /usr/lib/ncbi-entrez-direct.
   * debian/man/{bt-link,bt-srch,download-ncbi-data,edirect,efetch,efilter,
     einfo,elink,epost,esample,esearch,j2x,nquire,t2x,transmute,xplore,
     xtract}.1: Update for new release.
   * debian/man/{download-ncbi-data,esample}.1: Correct old typos
     (transposed letters, unescaped hyphen, missing parentheses).
   * debian/man/{einfo,efetch}.ncbi.1: Add alias pages for completeness.
   * debian/man/enquire.1: Retire per full incorporation of enquire into
     nquire, albeit on an experimental basis.
   * debian/man/{g2x,j2x,t2x}.1: Retire.
   * debian/man/skip-if-file-exists.1: Document new command.
   * debian/rules:
     - Belatedly install phrase-search (as is).
     - Account for new internal ecommon.sh sourceable; transformation of
       efetch, efilter, einfo, elink, epost, esearch, and esummary to
       ecommon.sh-based scripts (that still wrap Perl edirect by default,
       though); full incorporation of enquire (curl-/wget-based) as an
       experimental alternate mode for nquire (previously a pure edirect
       wrapper); retirement of dedicated g2x, j2x, and t2x binaries and of
       unbuilt s2p.go; and new as-is script skip-if-file-exists.
     - For efetch and einfo, install the upstream scripts with .ncbi
       extensions, since they won't necessarily reduce to edirect
       one-liners.
   * debian/tests/run-unit-test:
     - Correct gbf2xml invocation.  (It ignores any arguments and reads
       from standard input.)
     - Drop j2x test; renumber following tests accordingly.
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