[Debian-med-packaging] Bug#973058: kineticstools: FTBFS: mv: cannot move 'debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/resources' to 'debian/kineticstools-data/usr/share/kineticstools/resources': Directory not empty

Lucas Nussbaum lucas at debian.org
Tue Oct 27 17:05:46 GMT 2020 

Source: kineticstools
Version: 0.6.1+git20200325.3558942+dfsg-1
Severity: serious
Justification: FTBFS on amd64
Tags: bullseye sid ftbfs
Usertags: ftbfs-20201027 ftbfs-bullseye

Hi,

During a rebuild of all packages in sid, your package failed to build
on amd64.

Relevant part (hopefully):
> make[1]: Entering directory '/<<PKGBUILDDIR>>'
> dh_auto_install
> I: pybuild base:217: /usr/bin/python3.9 setup.py install --root /<<PKGBUILDDIR>>/debian/python3-kineticstools 
> running install
> running build
> running build_py
> running egg_info
> writing kineticsTools.egg-info/PKG-INFO
> writing dependency_links to kineticsTools.egg-info/dependency_links.txt
> writing entry points to kineticsTools.egg-info/entry_points.txt
> writing requirements to kineticsTools.egg-info/requires.txt
> writing top-level names to kineticsTools.egg-info/top_level.txt
> reading manifest file 'kineticsTools.egg-info/SOURCES.txt'
> reading manifest template 'MANIFEST.in'
> writing manifest file 'kineticsTools.egg-info/SOURCES.txt'
> running build_ext
> running install_lib
> creating /<<PKGBUILDDIR>>/debian/python3-kineticstools
> creating /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr
> creating /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib
> creating /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.9
> creating /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.9/dist-packages
> creating /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools
> copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools/summarizeModifications.py -> /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools
> copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools/BasicLdaEnricher.py -> /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools
> copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools/__init__.py -> /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools
> copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools/pipelineTools.py -> /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools
> copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools/MultiSiteCommon.py -> /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools
> copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools/MultiSiteDetection.py -> /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools
> copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools/PositiveControlEnricher.py -> /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools
> copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools/sharedArray.py -> /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools
> copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools/WorkerProcess.py -> /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools
> copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools/loader.py -> /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools
> copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools/KineticWorker.py -> /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools
> creating /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/tasks
> copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools/tasks/gather_bigwig.py -> /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/tasks
> copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools/tasks/__init__.py -> /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/tasks
> creating /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/tasks/__pycache__
> copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools/tasks/__pycache__/gather_bigwig.cpython-39.pyc -> /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/tasks/__pycache__
> copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools/tasks/__pycache__/__init__.cpython-39.pyc -> /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/tasks/__pycache__
> copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools/tree_predict.cpython-39-x86_64-linux-gnu.so -> /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools
> copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools/ReferenceUtils.py -> /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools
> copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools/MedakaLdaEnricher.py -> /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools
> copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools/MixtureEstimationMethods.py -> /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools
> creating /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/__pycache__
> copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools/__pycache__/ipdModel.cpython-39.pyc -> /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/__pycache__
> copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools/__pycache__/loader.cpython-39.pyc -> /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/__pycache__
> copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools/__pycache__/__init__.cpython-39.pyc -> /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/__pycache__
> copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools/__pycache__/sharedArray.cpython-39.pyc -> /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/__pycache__
> copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools/__pycache__/ReferenceUtils.cpython-39.pyc -> /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/__pycache__
> copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools/ModificationDecode.py -> /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools
> copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools/ResultWriter.py -> /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools
> copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools/ipdSummary.py -> /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools
> creating /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/internal
> copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools/internal/__init__.py -> /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/internal
> creating /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/resources
> copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools/resources/unknown.npz.gz -> /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/resources
> copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools/resources/SP2-C2.npz.gz -> /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/resources
> copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools/resources/SP3-C3.npz.gz -> /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/resources
> copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools/resources/P6-C4.npz.gz -> /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/resources
> copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools/ipdModel.py -> /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools
> copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_kineticstools/build/nosetests.xml -> /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.9/dist-packages
> byte-compiling /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/summarizeModifications.py to summarizeModifications.cpython-39.pyc
> byte-compiling /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/BasicLdaEnricher.py to BasicLdaEnricher.cpython-39.pyc
> byte-compiling /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/__init__.py to __init__.cpython-39.pyc
> byte-compiling /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/pipelineTools.py to pipelineTools.cpython-39.pyc
> byte-compiling /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/MultiSiteCommon.py to MultiSiteCommon.cpython-39.pyc
> byte-compiling /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/MultiSiteDetection.py to MultiSiteDetection.cpython-39.pyc
> byte-compiling /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/PositiveControlEnricher.py to PositiveControlEnricher.cpython-39.pyc
> byte-compiling /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/sharedArray.py to sharedArray.cpython-39.pyc
> byte-compiling /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/WorkerProcess.py to WorkerProcess.cpython-39.pyc
> byte-compiling /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/loader.py to loader.cpython-39.pyc
> byte-compiling /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/KineticWorker.py to KineticWorker.cpython-39.pyc
> byte-compiling /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/tasks/gather_bigwig.py to gather_bigwig.cpython-39.pyc
> byte-compiling /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/tasks/__init__.py to __init__.cpython-39.pyc
> byte-compiling /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/ReferenceUtils.py to ReferenceUtils.cpython-39.pyc
> byte-compiling /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/MedakaLdaEnricher.py to MedakaLdaEnricher.cpython-39.pyc
> byte-compiling /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/MixtureEstimationMethods.py to MixtureEstimationMethods.cpython-39.pyc
> byte-compiling /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/ModificationDecode.py to ModificationDecode.cpython-39.pyc
> byte-compiling /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/ResultWriter.py to ResultWriter.cpython-39.pyc
> byte-compiling /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/ipdSummary.py to ipdSummary.cpython-39.pyc
> byte-compiling /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/internal/__init__.py to __init__.cpython-39.pyc
> byte-compiling /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/ipdModel.py to ipdModel.cpython-39.pyc
> running install_egg_info
> Copying kineticsTools.egg-info to /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools-0.7.0.egg-info
> Skipping SOURCES.txt
> running install_scripts
> Installing ipdSummary script to /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/bin
> Installing summarizeModifications script to /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/bin
> I: pybuild base:217: /usr/bin/python3 setup.py install --root /<<PKGBUILDDIR>>/debian/python3-kineticstools 
> running install
> running build
> running build_py
> running egg_info
> writing kineticsTools.egg-info/PKG-INFO
> writing dependency_links to kineticsTools.egg-info/dependency_links.txt
> writing entry points to kineticsTools.egg-info/entry_points.txt
> writing requirements to kineticsTools.egg-info/requires.txt
> writing top-level names to kineticsTools.egg-info/top_level.txt
> reading manifest file 'kineticsTools.egg-info/SOURCES.txt'
> reading manifest template 'MANIFEST.in'
> writing manifest file 'kineticsTools.egg-info/SOURCES.txt'
> running build_ext
> running install_lib
> creating /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.8
> creating /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.8/dist-packages
> creating /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.8/dist-packages/kineticsTools
> copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_kineticstools/build/kineticsTools/summarizeModifications.py -> /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.8/dist-packages/kineticsTools
> copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_kineticstools/build/kineticsTools/BasicLdaEnricher.py -> /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.8/dist-packages/kineticsTools
> copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_kineticstools/build/kineticsTools/tree_predict.cpython-38-x86_64-linux-gnu.so -> /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.8/dist-packages/kineticsTools
> copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_kineticstools/build/kineticsTools/__init__.py -> /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.8/dist-packages/kineticsTools
> copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_kineticstools/build/kineticsTools/pipelineTools.py -> /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.8/dist-packages/kineticsTools
> copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_kineticstools/build/kineticsTools/MultiSiteCommon.py -> /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.8/dist-packages/kineticsTools
> copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_kineticstools/build/kineticsTools/MultiSiteDetection.py -> /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.8/dist-packages/kineticsTools
> copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_kineticstools/build/kineticsTools/PositiveControlEnricher.py -> /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.8/dist-packages/kineticsTools
> copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_kineticstools/build/kineticsTools/sharedArray.py -> /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.8/dist-packages/kineticsTools
> copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_kineticstools/build/kineticsTools/WorkerProcess.py -> /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.8/dist-packages/kineticsTools
> copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_kineticstools/build/kineticsTools/loader.py -> /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.8/dist-packages/kineticsTools
> copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_kineticstools/build/kineticsTools/KineticWorker.py -> /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.8/dist-packages/kineticsTools
> creating /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.8/dist-packages/kineticsTools/tasks
> copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_kineticstools/build/kineticsTools/tasks/gather_bigwig.py -> /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.8/dist-packages/kineticsTools/tasks
> copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_kineticstools/build/kineticsTools/tasks/__init__.py -> /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.8/dist-packages/kineticsTools/tasks
> creating /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.8/dist-packages/kineticsTools/tasks/__pycache__
> copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_kineticstools/build/kineticsTools/tasks/__pycache__/gather_bigwig.cpython-38.pyc -> /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.8/dist-packages/kineticsTools/tasks/__pycache__
> copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_kineticstools/build/kineticsTools/tasks/__pycache__/__init__.cpython-38.pyc -> /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.8/dist-packages/kineticsTools/tasks/__pycache__
> copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_kineticstools/build/kineticsTools/ReferenceUtils.py -> /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.8/dist-packages/kineticsTools
> copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_kineticstools/build/kineticsTools/MedakaLdaEnricher.py -> /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.8/dist-packages/kineticsTools
> copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_kineticstools/build/kineticsTools/MixtureEstimationMethods.py -> /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.8/dist-packages/kineticsTools
> creating /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.8/dist-packages/kineticsTools/__pycache__
> copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_kineticstools/build/kineticsTools/__pycache__/loader.cpython-38.pyc -> /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.8/dist-packages/kineticsTools/__pycache__
> copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_kineticstools/build/kineticsTools/__pycache__/ipdModel.cpython-38.pyc -> /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.8/dist-packages/kineticsTools/__pycache__
> copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_kineticstools/build/kineticsTools/__pycache__/ReferenceUtils.cpython-38.pyc -> /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.8/dist-packages/kineticsTools/__pycache__
> copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_kineticstools/build/kineticsTools/__pycache__/sharedArray.cpython-38.pyc -> /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.8/dist-packages/kineticsTools/__pycache__
> copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_kineticstools/build/kineticsTools/__pycache__/__init__.cpython-38.pyc -> /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.8/dist-packages/kineticsTools/__pycache__
> copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_kineticstools/build/kineticsTools/ModificationDecode.py -> /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.8/dist-packages/kineticsTools
> copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_kineticstools/build/kineticsTools/ResultWriter.py -> /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.8/dist-packages/kineticsTools
> copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_kineticstools/build/kineticsTools/ipdSummary.py -> /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.8/dist-packages/kineticsTools
> creating /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.8/dist-packages/kineticsTools/internal
> copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_kineticstools/build/kineticsTools/internal/__init__.py -> /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.8/dist-packages/kineticsTools/internal
> creating /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.8/dist-packages/kineticsTools/resources
> copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_kineticstools/build/kineticsTools/resources/unknown.npz.gz -> /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.8/dist-packages/kineticsTools/resources
> copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_kineticstools/build/kineticsTools/resources/SP2-C2.npz.gz -> /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.8/dist-packages/kineticsTools/resources
> copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_kineticstools/build/kineticsTools/resources/SP3-C3.npz.gz -> /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.8/dist-packages/kineticsTools/resources
> copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_kineticstools/build/kineticsTools/resources/P6-C4.npz.gz -> /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.8/dist-packages/kineticsTools/resources
> copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_kineticstools/build/kineticsTools/ipdModel.py -> /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.8/dist-packages/kineticsTools
> copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.8_kineticstools/build/nosetests.xml -> /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.8/dist-packages
> byte-compiling /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.8/dist-packages/kineticsTools/summarizeModifications.py to summarizeModifications.cpython-38.pyc
> byte-compiling /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.8/dist-packages/kineticsTools/BasicLdaEnricher.py to BasicLdaEnricher.cpython-38.pyc
> byte-compiling /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.8/dist-packages/kineticsTools/__init__.py to __init__.cpython-38.pyc
> byte-compiling /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.8/dist-packages/kineticsTools/pipelineTools.py to pipelineTools.cpython-38.pyc
> byte-compiling /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.8/dist-packages/kineticsTools/MultiSiteCommon.py to MultiSiteCommon.cpython-38.pyc
> byte-compiling /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.8/dist-packages/kineticsTools/MultiSiteDetection.py to MultiSiteDetection.cpython-38.pyc
> byte-compiling /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.8/dist-packages/kineticsTools/PositiveControlEnricher.py to PositiveControlEnricher.cpython-38.pyc
> byte-compiling /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.8/dist-packages/kineticsTools/sharedArray.py to sharedArray.cpython-38.pyc
> byte-compiling /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.8/dist-packages/kineticsTools/WorkerProcess.py to WorkerProcess.cpython-38.pyc
> byte-compiling /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.8/dist-packages/kineticsTools/loader.py to loader.cpython-38.pyc
> byte-compiling /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.8/dist-packages/kineticsTools/KineticWorker.py to KineticWorker.cpython-38.pyc
> byte-compiling /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.8/dist-packages/kineticsTools/tasks/gather_bigwig.py to gather_bigwig.cpython-38.pyc
> byte-compiling /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.8/dist-packages/kineticsTools/tasks/__init__.py to __init__.cpython-38.pyc
> byte-compiling /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.8/dist-packages/kineticsTools/ReferenceUtils.py to ReferenceUtils.cpython-38.pyc
> byte-compiling /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.8/dist-packages/kineticsTools/MedakaLdaEnricher.py to MedakaLdaEnricher.cpython-38.pyc
> byte-compiling /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.8/dist-packages/kineticsTools/MixtureEstimationMethods.py to MixtureEstimationMethods.cpython-38.pyc
> byte-compiling /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.8/dist-packages/kineticsTools/ModificationDecode.py to ModificationDecode.cpython-38.pyc
> byte-compiling /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.8/dist-packages/kineticsTools/ResultWriter.py to ResultWriter.cpython-38.pyc
> byte-compiling /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.8/dist-packages/kineticsTools/ipdSummary.py to ipdSummary.cpython-38.pyc
> byte-compiling /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.8/dist-packages/kineticsTools/internal/__init__.py to __init__.cpython-38.pyc
> byte-compiling /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.8/dist-packages/kineticsTools/ipdModel.py to ipdModel.cpython-38.pyc
> running install_egg_info
> Copying kineticsTools.egg-info to /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/lib/python3.8/dist-packages/kineticsTools-0.7.0.egg-info
> Skipping SOURCES.txt
> running install_scripts
> Installing ipdSummary script to /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/bin
> Installing summarizeModifications script to /<<PKGBUILDDIR>>/debian/python3-kineticstools/usr/bin
> mkdir -p /<<PKGBUILDDIR>>/debian/kineticstools/usr/bin
> mv debian/python3-kineticstools/usr/bin/* /<<PKGBUILDDIR>>/debian/kineticstools/usr/bin
> mkdir -p /<<PKGBUILDDIR>>/debian/kineticstools/usr/share/man//man1
> rst2man doc/manual.rst > /<<PKGBUILDDIR>>/debian/kineticstools/usr/share/man//man1/ipdSummary.1
> doc/manual.rst:53: (WARNING/2) "math" role not supported
> doc/manual.rst:55: (WARNING/2) "math" role not supported
> doc/manual.rst:55: (WARNING/2) "math" role not supported
> mkdir -p debian/kineticstools-data/usr/share/kineticstools
> mv debian/python3-kineticstools/usr/lib/python3.*/dist-packages/kineticsTools/resources debian/kineticstools-data/usr/share/kineticstools/
> mv: cannot move 'debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/resources' to 'debian/kineticstools-data/usr/share/kineticstools/resources': Directory not empty
> make[1]: *** [debian/rules:29: override_dh_auto_install] Error 1

The full build log is available from:
   http://qa-logs.debian.net/2020/10/27/kineticstools_0.6.1+git20200325.3558942+dfsg-1_unstable.log

A list of current common problems and possible solutions is available at
http://wiki.debian.org/qa.debian.org/FTBFS . You're welcome to contribute!

About the archive rebuild: The rebuild was done on EC2 VM instances from
Amazon Web Services, using a clean, minimal and up-to-date chroot. Every
failed build was retried once to eliminate random failures.

More information about the Debian-med-packaging mailing list