[Debian-med-packaging] Bug#963088: bppsuite: autopkgtest failure on arm64: precision issue in reference data

[Andreas Tille]

Control: tags -1 upstream
Control: forwarded -1 Julien Dutheil <julien.dutheil at univ-montp2.fr>

Hi Julien,

could you please relax the check a bit to let this test pass also on arm64?

Kind regards

      Andreas.

On Thu, Jun 18, 2020 at 09:12:17PM +0200, Paul Gevers wrote:
> Source: bppsuite
> Version: 2.4.1-2
> X-Debbugs-CC: debian-ci at lists.debian.org
> Severity: serious
> User: debian-ci at lists.debian.org
> Usertags: fails-always
> 
> Dear maintainer(s),
> 
> You recently added an autopkgtest to your package bppsuite, great.
> However, it fails on arm64. Currently this failure is blocking the
> migration to testing [1]. Can you please investigate the situation and
> fix it?
> 
> I copied some of the output at the bottom of this report. It seems to
> show a calculation precision issue in your reference data, but maybe the
> answer is really good and it's showing an issue with your package on
> arm64. (0.00762627 vs 0.00762628)
> 
> More information about this bug and the reason for filing it can be found on
> https://wiki.debian.org/ContinuousIntegration/RegressionEmailInformation
> 
> Paul
> 
> [1] https://qa.debian.org/excuses.php?package=bppsuite
> 
> https://ci.debian.net/data/autopkgtest/testing/amd64/b/bppsuite/5887912/log.gz
> 
> <
> (((((6.langur_Sen&Sve:0.00790177,7.langur_Tob&Tfr:1e-06,8.Douc_langur_Pne:0.0233448):0.00758139,9.probiscis_Nla:0.00784523):0.0258479,5.colobus_Cgu&Can:0.036229):0.077728,(((10.baboon_Pcy:0.0080218,11.mangabey_Cat:1e-06):1e-06,12.rhesus_Mmu:0.00761117):1e-06,13.Allen_Ani:0.015264,(14.talapoin_Mta:0.0156828,(15.patas_Epa:0.0160261,16.vervet_Cae:0.00794742):0.00762627):0.0076675):0.0173244):0.0393703,(((1.human:0.0161234,2.chimp_bonobo_gorilla:1e-06):0.00762358,3.orangutan_Ppy:1e-06):0.00723969,4.gibbon_Ggo:0.0319335):0.070116,(17.squirrel_m:0.0258088,(18.tamarin_Soe:0.0317538,19.Marmoset_Cja:0.0413489):1e-06):0.123173);
> ---
> >
> (((((6.langur_Sen&Sve:0.00790177,7.langur_Tob&Tfr:1e-06,8.Douc_langur_Pne:0.0233448):0.00758139,9.probiscis_Nla:0.00784523):0.0258479,5.colobus_Cgu&Can:0.036229):0.077728,(((10.baboon_Pcy:0.0080218,11.mangabey_Cat:1e-06):1e-06,12.rhesus_Mmu:0.00761117):1e-06,13.Allen_Ani:0.015264,(14.talapoin_Mta:0.0156828,(15.patas_Epa:0.0160261,16.vervet_Cae:0.00794742):0.00762628):0.0076675):0.0173244):0.0393703,(((1.human:0.0161234,2.chimp_bonobo_gorilla:1e-06):0.00762358,3.orangutan_Ppy:1e-06):0.00723969,4.gibbon_Ggo:0.0319335):0.070116,(17.squirrel_m:0.0258088,(18.tamarin_Soe:0.0317538,19.Marmoset_Cja:0.0413489):1e-06):0.123173);
> 
> 




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